Oligonucleotide Probes Used in This Study
| Human probes (5′ to 3′ ): | ||
| FP1 | TATTATTATCTTTATTTTGCCATGACAAGA | |
| FP2 | TGACAAGACTGAGCTCAGAAGAGTCAAGCA | |
| FP3 | ATTCTGTGGATAAAGGAGACAGCCATGAAG | |
| FP4 | TCAAGGAATTTTGACTCAGCAAACACAAGA | |
| FP5 | CGGTGACTTTGCGAGCTGGTGTGCCAGATG | |
| FP6 | CGAGCTGGTGTGCCAGATGTGTCTATCAGAGGTTCCAGG | |
| FP7 | GGCTGGCCACCAGCTATCAGGGCCCAGATGG | |
| FP8 | GGCAGGCTCAGATAGGTGGTTAGGTCAGGTTGGT | |
| FP8M | GGCAGGCTCAGATAGGTGGTTTCTTTGGGTTGGTGGTGC | |
| FP9 | GGTTGGTGGTGCTGGGTGGAGTCCATGACTC | |
| FP10 | GGGTGGAGTCCATGACTCCCAGGAGCCAGG | |
| FP11 | GGAGCCAGGAGAGATAGACCATGAG | |
| FP12 | CAGCATAGCAGCATTTTTCATTCTACTACT | |
| FP13 | CTATCTCATAGGGTTATTATGAGGATCAAA | |
| FP14 | AGTGGCCTAACAGTTCAGGACAGAGCTATGGGCTTCCTA | |
| FP15 | ATGTTAATTTAGCAATGGGCTGGGACCCT | |
| FP16 | TTAATGAAAGCTTAGCTTTCATTAAAGATT | |
| FP17 | GGAGTTGAGAGGGAAACAAGATGGTGAAGG | |
| FP18 | GAAGGGACTAGAAACCACATGAGAGACACGAGG | |
| FP19 | AAGTGGGAATTAATACTTACTGAAATCTTTCTATATGTC | |
| FP20 | TGAACATACTATAATTAATACTAATGATAA | |
| FP21 | ATAATTAATACTAATGATAAGTAACACCTCTT | |
| FP22 | TAACACCTCTTGAGTACTTAGTATAT | |
| FP23 | GAGTACTTAGTATATGCTAGAATCAAATTT | |
| FP24 | GCTAGAATCAAATTTAAGTTTATCATATGAGGalago probes (5′ to 3′ ): | |
| FP1 | CATTTTGACATAGGGGTATTTTTGGA | |
| FP2 | TGAGAAGATAGAGCTCAGAGGAGTCAAGAC | |
| FP3 | GGGCTGTGGGTGAAGGAGGCAGCCAGGCAG | |
| FP4 | TTAGGGAACTTTGACTCAGCAACTCAGCAA | |
| FP5 | CTGTGACTTTAGGAGCTGATGTGCAAGATG | |
| FP6 | GGAGCTGATGTGCAAGATGTGTCTATCGGAGGTTGCAGA | |
| FP7 | GGCTAGCTGCAAACTATCAGGGCCAGAAGG | |
| FP8 | TGTGGGCTCAGATAGTTGGTTAGGTCAGGTTGGC | |
| FP9 | GGTTGGCAGCTCTGGGTGGAGTCCATGACTC | |
| FP10 | TCTGGGTGGAGTCCATGACTCTTGGAGGTG | |
| FP11 | ACTCTTGGAGGTGATAGACCAGGAGTGTGG | |
| FP12 | CAACCCAGCAGCATTTTTTCGTTATACTAT | |
| FP13 | CTATCATATGAGGGTATTATGAACATTAAA | |
| FP14 | AGGGCCTTAGGAATTCAGGACAGAGCTGTGGACACCTTA | |
| FP15 | ATGTTTAATTTAGCAATGGCCTGGGTCCTC | |
| FP16 | AAAGTTCAGAACCTAGCTTTAATGGCTCCT | |
| FP17 | GAAGAAGAGAGAGAAACAGGATGATGAAGG | |
| FP18 | GAAGGGACTAGAGACCACACAAGGAACACAA | |
| FP19 | AGATGGGACTTTAACTTACTGAAGTCTTTCTACATGCCA | |
| FP20 | TAAGCATATTATAATTAATGATAATGATAA | |
| FP21 | ATAATTAATGATAATGATAAGCAGAACCTCTT | |
| FP22 | CAGAACCTCTTGAGGGCTGAGGATAG | |
| FP23 | GAGGGCTGAGGATAGGCTATAATCTAATTT | |
| FP24 | GCTATAATCTAATTTAAGTCCATTGTGTTA | |
| Human probes (5′ to 3′ ): | ||
| FP1 | TATTATTATCTTTATTTTGCCATGACAAGA | |
| FP2 | TGACAAGACTGAGCTCAGAAGAGTCAAGCA | |
| FP3 | ATTCTGTGGATAAAGGAGACAGCCATGAAG | |
| FP4 | TCAAGGAATTTTGACTCAGCAAACACAAGA | |
| FP5 | CGGTGACTTTGCGAGCTGGTGTGCCAGATG | |
| FP6 | CGAGCTGGTGTGCCAGATGTGTCTATCAGAGGTTCCAGG | |
| FP7 | GGCTGGCCACCAGCTATCAGGGCCCAGATGG | |
| FP8 | GGCAGGCTCAGATAGGTGGTTAGGTCAGGTTGGT | |
| FP8M | GGCAGGCTCAGATAGGTGGTTTCTTTGGGTTGGTGGTGC | |
| FP9 | GGTTGGTGGTGCTGGGTGGAGTCCATGACTC | |
| FP10 | GGGTGGAGTCCATGACTCCCAGGAGCCAGG | |
| FP11 | GGAGCCAGGAGAGATAGACCATGAG | |
| FP12 | CAGCATAGCAGCATTTTTCATTCTACTACT | |
| FP13 | CTATCTCATAGGGTTATTATGAGGATCAAA | |
| FP14 | AGTGGCCTAACAGTTCAGGACAGAGCTATGGGCTTCCTA | |
| FP15 | ATGTTAATTTAGCAATGGGCTGGGACCCT | |
| FP16 | TTAATGAAAGCTTAGCTTTCATTAAAGATT | |
| FP17 | GGAGTTGAGAGGGAAACAAGATGGTGAAGG | |
| FP18 | GAAGGGACTAGAAACCACATGAGAGACACGAGG | |
| FP19 | AAGTGGGAATTAATACTTACTGAAATCTTTCTATATGTC | |
| FP20 | TGAACATACTATAATTAATACTAATGATAA | |
| FP21 | ATAATTAATACTAATGATAAGTAACACCTCTT | |
| FP22 | TAACACCTCTTGAGTACTTAGTATAT | |
| FP23 | GAGTACTTAGTATATGCTAGAATCAAATTT | |
| FP24 | GCTAGAATCAAATTTAAGTTTATCATATGAGGalago probes (5′ to 3′ ): | |
| FP1 | CATTTTGACATAGGGGTATTTTTGGA | |
| FP2 | TGAGAAGATAGAGCTCAGAGGAGTCAAGAC | |
| FP3 | GGGCTGTGGGTGAAGGAGGCAGCCAGGCAG | |
| FP4 | TTAGGGAACTTTGACTCAGCAACTCAGCAA | |
| FP5 | CTGTGACTTTAGGAGCTGATGTGCAAGATG | |
| FP6 | GGAGCTGATGTGCAAGATGTGTCTATCGGAGGTTGCAGA | |
| FP7 | GGCTAGCTGCAAACTATCAGGGCCAGAAGG | |
| FP8 | TGTGGGCTCAGATAGTTGGTTAGGTCAGGTTGGC | |
| FP9 | GGTTGGCAGCTCTGGGTGGAGTCCATGACTC | |
| FP10 | TCTGGGTGGAGTCCATGACTCTTGGAGGTG | |
| FP11 | ACTCTTGGAGGTGATAGACCAGGAGTGTGG | |
| FP12 | CAACCCAGCAGCATTTTTTCGTTATACTAT | |
| FP13 | CTATCATATGAGGGTATTATGAACATTAAA | |
| FP14 | AGGGCCTTAGGAATTCAGGACAGAGCTGTGGACACCTTA | |
| FP15 | ATGTTTAATTTAGCAATGGCCTGGGTCCTC | |
| FP16 | AAAGTTCAGAACCTAGCTTTAATGGCTCCT | |
| FP17 | GAAGAAGAGAGAGAAACAGGATGATGAAGG | |
| FP18 | GAAGGGACTAGAGACCACACAAGGAACACAA | |
| FP19 | AGATGGGACTTTAACTTACTGAAGTCTTTCTACATGCCA | |
| FP20 | TAAGCATATTATAATTAATGATAATGATAA | |
| FP21 | ATAATTAATGATAATGATAAGCAGAACCTCTT | |
| FP22 | CAGAACCTCTTGAGGGCTGAGGATAG | |
| FP23 | GAGGGCTGAGGATAGGCTATAATCTAATTT | |
| FP24 | GCTATAATCTAATTTAAGTCCATTGTGTTA | |
| Specific competitors (probes with known factor binding sites) | Reference | |
| AP1 | TGGGGAACCTGTTCTGAGTCACTGGAG | 65 |
| CDP | GCTTTTCAGTTGACCGGTGATTATTAGCCAATTTCTGATAAA | 46 |
| CP1(−88γ) | CCAGCCTTGCCTTGACCATAGCCTTGACA | 33 |
| CSBP-2(−698ɛ) | ATCTTTTCTGTCTGTCCTCTCTAGGGAATC | 32 |
| CSBP-2/SSP(−835ɛ) | TCCCAGTGAGAAGTATAAGCAGGACAGACAGGCAAGCAAG | 32 |
| ELKF | TAGAGCCACACCCTGGTAAG | 66 |
| GATA1/Oct-1(−175γ) | CCACACTATCTCAATGCAAATATCTGTCTGAAACG | 33 |
| G1/G2 | AGTGACCTTGACCAATAGCCTC | 37 |
| NF-E2 | TGGGGAACCTGTGCTGAGTCACTGGAG | 65 |
| Sp1 | TGGCTAAACTCCACCCATGGGTGGCCAGC | 67 |
| TEF-2(SV40 GT-1) | CTAGACTTTCCACACCCTT | 68 |
| SSP(−50γ) | TCCCTAGCCAGCCGCCGGCCCCTGGCCTCACTGGA | 33 |
| USF | AGAAGCTGACCACCTGACTAAA | 69 |
| YY1 | CTGCAGTAACGCCATTTTGCAAGGCAT | 70 |
| Specific competitors (probes with known factor binding sites) | Reference | |
| AP1 | TGGGGAACCTGTTCTGAGTCACTGGAG | 65 |
| CDP | GCTTTTCAGTTGACCGGTGATTATTAGCCAATTTCTGATAAA | 46 |
| CP1(−88γ) | CCAGCCTTGCCTTGACCATAGCCTTGACA | 33 |
| CSBP-2(−698ɛ) | ATCTTTTCTGTCTGTCCTCTCTAGGGAATC | 32 |
| CSBP-2/SSP(−835ɛ) | TCCCAGTGAGAAGTATAAGCAGGACAGACAGGCAAGCAAG | 32 |
| ELKF | TAGAGCCACACCCTGGTAAG | 66 |
| GATA1/Oct-1(−175γ) | CCACACTATCTCAATGCAAATATCTGTCTGAAACG | 33 |
| G1/G2 | AGTGACCTTGACCAATAGCCTC | 37 |
| NF-E2 | TGGGGAACCTGTGCTGAGTCACTGGAG | 65 |
| Sp1 | TGGCTAAACTCCACCCATGGGTGGCCAGC | 67 |
| TEF-2(SV40 GT-1) | CTAGACTTTCCACACCCTT | 68 |
| SSP(−50γ) | TCCCTAGCCAGCCGCCGGCCCCTGGCCTCACTGGA | 33 |
| USF | AGAAGCTGACCACCTGACTAAA | 69 |
| YY1 | CTGCAGTAACGCCATTTTGCAAGGCAT | 70 |
Underlined sequences represent phylogenetic footprints.