Clinical and hematological characteristics of patients with SAMD9L and SAMD9 mutations
ID (UB) . | Mutation . | Sex/age . | Family history . | Hb, g/dL Plt, × 109/L ANC, × 109/L . | BM . | BM cytogenetic . | Short TLM . | GR . | Immune deficiency . | Neurological defect . | Genitourinary abnormality . | Other . | Age at BMT . | Outcome . |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
195 | SAMD9L* | M/8 mo | Consanguinity | 6.5 | Hypocellular dysplasia | 45,XY, −7[7/15] | No | No | No | No | No | — | 24 mo | Alive, 2 months after HSCT, GVHD |
5 | ||||||||||||||
0.06 | ||||||||||||||
609 | SAMD9L | F/13 mo | Yes (see Figure 3E) | <6 | N/A | ND | ND | No | No | Nystagmus | No | — | — | Mild thrombocytopenia (33-y old) |
<2 | ||||||||||||||
<1 | ||||||||||||||
612 | SAMD9L | M/13 mo | Yes (see Figure 3E) | 6 | Hypocellular | 45,XY, −7[16/28] | No | No | Transient Ig deficiency (IgG < 3 g) | Nystagmus | No | — | — | BM FISH −7[8%] (2-y old) |
10 | Mild cytopenias (5-y old) | |||||||||||||
0.25 | ||||||||||||||
194 | SAMD9L | F/13 mo | Simplex | 6 | Hypocellular | 45,XX, −7 | No | No | No | No | No | — | 25 mo | Spontaneous blood cell count improvement; relapse after vaccination; clonal progression with del6q; then HSCT |
17 | ||||||||||||||
0.27 | ||||||||||||||
081 | SAMD9L | M/13 mo | Uncle with Hodgkin disease | 9.5 | Hypocellular dysplasia | Normal, no −7 by FISH | ND | No | No | Hydrocephaly, arachnoid cyst on MRI | No | — | — | Complete regression of cytopenias (9-y old) |
3 | ||||||||||||||
0.25 | ||||||||||||||
022 | SAMD9L TERC | M/27 y | Father with transient thrombo-cytopenia. Grandfather died of AML | 13 | Hypocellular dysplasia | Del13q, then −7 | Yes | No | Recurrent infection in infancy | No | No | Hepatitis, pulmonary fibrosis | 33 y | RAEB1 with del13q and −7 (33-y old); CR after 1 cycle of azacytidine; HSCT; pulmonary fibrosis (37-y old) |
79 | ||||||||||||||
1.68 | ||||||||||||||
049 | SAMD9L | F/10 mo | Brother with cytopenias | 11 | Hypocellular dysplasia | 45,XX, −7[17/20] | No | No | No | No | No | — | 24 mo | Alive 5 years after HSCT |
<100 | ||||||||||||||
0.72 | ||||||||||||||
085 | SAMD9L | F/20 mo | Mother and uncle with mild intellectual disability | 8.2 | Dysplasia | Normal | No | Yes | Ig deficiency (IgG, 3 g) | Mild intellectual disability, hydrocephaly, bilateral white substance changes and arachnoid cyst on MRI | No | Asthma, coxa valga | 27 mo | Neurological defects with unsteady gait (6-y old), cerebellar hypoplasia and abnormal white matter signal and arachnoid cyst on MRI. Growth defect and parenteral nutrition |
20 | ||||||||||||||
1.7 | ||||||||||||||
260 | SAMD9L RTEL1 | M/46 y | — | 10.9 | Dysplasia | 46,XY, der(7)[6]/ 46,XY,ish add(7)[14] | Yes | No | — | No | No | Tongue cancer, cirrhosis | — | Lost sight |
19 | ||||||||||||||
<1 | ||||||||||||||
112 | SAMD9L | F/19 mo | Simplex | 8.1 | N/A | Normal no −7 on FISH | No | Yes | N/A | No | No | — | 19 mo | Died in intensive care unit during severe infection (21-mo old) |
5 | ||||||||||||||
0.12 | ||||||||||||||
096 | SAMD9 | F/3 y | Simplex | 11.9 | Hypocellular dysplasia | 45,XX, −7[12/20] | No | Yes | Severe infections | Abnormal white matter signal on MRI | No | Hyper-thyroidism | 4 y | No GVHD, persistent hyperthyroidism (9-y old) |
240 | ||||||||||||||
0 | ||||||||||||||
136 | SAMD9 | M/9 y | Simplex | 12 | Dysplasia | −7 | ND | Yes | No | No | No | — | 9 y | No major complication after HSCT (15-y old) |
15 | ||||||||||||||
0.5 | ||||||||||||||
037 | SAMD9 | F/8 y | Simplex | 10.2 | Dysplasia | Normal | ND | Yes | Ig deficiency (IgM, IgG2, IgG4), recurrent infections | No | No | — | — | Thrombocytopenia with dysplasia in BM, normal karyotype, immunodeficiency (15-y old) |
14 | ||||||||||||||
0.94 | ||||||||||||||
660 | SAMD9 | M/24 mo | Simplex | 11.4 | Dysplasia | 45,XY, −7[14/20] | ND | Yes | No | Language delay | Hypospadias, testicular dysgenesis | Diarrhea | — | Complete regression of cytopenias and of −7, persists at 6-y old |
19 | ||||||||||||||
0.7 | ||||||||||||||
062 | SAMD9 RTEL1 | F/M/21 y | Simplex | 12.1 | Hypocellular dysplasia | 45,XY, −7 | No | No | Recurrent severe infections | No | Hypospadias, cryptorchidism, sexual ambiguity, renal hypoplasia | Diarrhea | 21 y | HSCT, died (22-y old) |
88 | ||||||||||||||
0.5 | ||||||||||||||
026 | SAMD9 | F/6 y | Simplex | 11.5 | Hypocellular | 45,XX, −7 | No | Yes | IgG deficiency, recurrent infections | No | No | — | 13 y | No major complication after HSCT (20-y old) |
102 | ||||||||||||||
1.0 |
ID (UB) . | Mutation . | Sex/age . | Family history . | Hb, g/dL Plt, × 109/L ANC, × 109/L . | BM . | BM cytogenetic . | Short TLM . | GR . | Immune deficiency . | Neurological defect . | Genitourinary abnormality . | Other . | Age at BMT . | Outcome . |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
195 | SAMD9L* | M/8 mo | Consanguinity | 6.5 | Hypocellular dysplasia | 45,XY, −7[7/15] | No | No | No | No | No | — | 24 mo | Alive, 2 months after HSCT, GVHD |
5 | ||||||||||||||
0.06 | ||||||||||||||
609 | SAMD9L | F/13 mo | Yes (see Figure 3E) | <6 | N/A | ND | ND | No | No | Nystagmus | No | — | — | Mild thrombocytopenia (33-y old) |
<2 | ||||||||||||||
<1 | ||||||||||||||
612 | SAMD9L | M/13 mo | Yes (see Figure 3E) | 6 | Hypocellular | 45,XY, −7[16/28] | No | No | Transient Ig deficiency (IgG < 3 g) | Nystagmus | No | — | — | BM FISH −7[8%] (2-y old) |
10 | Mild cytopenias (5-y old) | |||||||||||||
0.25 | ||||||||||||||
194 | SAMD9L | F/13 mo | Simplex | 6 | Hypocellular | 45,XX, −7 | No | No | No | No | No | — | 25 mo | Spontaneous blood cell count improvement; relapse after vaccination; clonal progression with del6q; then HSCT |
17 | ||||||||||||||
0.27 | ||||||||||||||
081 | SAMD9L | M/13 mo | Uncle with Hodgkin disease | 9.5 | Hypocellular dysplasia | Normal, no −7 by FISH | ND | No | No | Hydrocephaly, arachnoid cyst on MRI | No | — | — | Complete regression of cytopenias (9-y old) |
3 | ||||||||||||||
0.25 | ||||||||||||||
022 | SAMD9L TERC | M/27 y | Father with transient thrombo-cytopenia. Grandfather died of AML | 13 | Hypocellular dysplasia | Del13q, then −7 | Yes | No | Recurrent infection in infancy | No | No | Hepatitis, pulmonary fibrosis | 33 y | RAEB1 with del13q and −7 (33-y old); CR after 1 cycle of azacytidine; HSCT; pulmonary fibrosis (37-y old) |
79 | ||||||||||||||
1.68 | ||||||||||||||
049 | SAMD9L | F/10 mo | Brother with cytopenias | 11 | Hypocellular dysplasia | 45,XX, −7[17/20] | No | No | No | No | No | — | 24 mo | Alive 5 years after HSCT |
<100 | ||||||||||||||
0.72 | ||||||||||||||
085 | SAMD9L | F/20 mo | Mother and uncle with mild intellectual disability | 8.2 | Dysplasia | Normal | No | Yes | Ig deficiency (IgG, 3 g) | Mild intellectual disability, hydrocephaly, bilateral white substance changes and arachnoid cyst on MRI | No | Asthma, coxa valga | 27 mo | Neurological defects with unsteady gait (6-y old), cerebellar hypoplasia and abnormal white matter signal and arachnoid cyst on MRI. Growth defect and parenteral nutrition |
20 | ||||||||||||||
1.7 | ||||||||||||||
260 | SAMD9L RTEL1 | M/46 y | — | 10.9 | Dysplasia | 46,XY, der(7)[6]/ 46,XY,ish add(7)[14] | Yes | No | — | No | No | Tongue cancer, cirrhosis | — | Lost sight |
19 | ||||||||||||||
<1 | ||||||||||||||
112 | SAMD9L | F/19 mo | Simplex | 8.1 | N/A | Normal no −7 on FISH | No | Yes | N/A | No | No | — | 19 mo | Died in intensive care unit during severe infection (21-mo old) |
5 | ||||||||||||||
0.12 | ||||||||||||||
096 | SAMD9 | F/3 y | Simplex | 11.9 | Hypocellular dysplasia | 45,XX, −7[12/20] | No | Yes | Severe infections | Abnormal white matter signal on MRI | No | Hyper-thyroidism | 4 y | No GVHD, persistent hyperthyroidism (9-y old) |
240 | ||||||||||||||
0 | ||||||||||||||
136 | SAMD9 | M/9 y | Simplex | 12 | Dysplasia | −7 | ND | Yes | No | No | No | — | 9 y | No major complication after HSCT (15-y old) |
15 | ||||||||||||||
0.5 | ||||||||||||||
037 | SAMD9 | F/8 y | Simplex | 10.2 | Dysplasia | Normal | ND | Yes | Ig deficiency (IgM, IgG2, IgG4), recurrent infections | No | No | — | — | Thrombocytopenia with dysplasia in BM, normal karyotype, immunodeficiency (15-y old) |
14 | ||||||||||||||
0.94 | ||||||||||||||
660 | SAMD9 | M/24 mo | Simplex | 11.4 | Dysplasia | 45,XY, −7[14/20] | ND | Yes | No | Language delay | Hypospadias, testicular dysgenesis | Diarrhea | — | Complete regression of cytopenias and of −7, persists at 6-y old |
19 | ||||||||||||||
0.7 | ||||||||||||||
062 | SAMD9 RTEL1 | F/M/21 y | Simplex | 12.1 | Hypocellular dysplasia | 45,XY, −7 | No | No | Recurrent severe infections | No | Hypospadias, cryptorchidism, sexual ambiguity, renal hypoplasia | Diarrhea | 21 y | HSCT, died (22-y old) |
88 | ||||||||||||||
0.5 | ||||||||||||||
026 | SAMD9 | F/6 y | Simplex | 11.5 | Hypocellular | 45,XX, −7 | No | Yes | IgG deficiency, recurrent infections | No | No | — | 13 y | No major complication after HSCT (20-y old) |
102 | ||||||||||||||
1.0 |
—, Not applicable; BMT, BM transplantation; CR, complete remission; FISH, fluorescence in situ hybridization; GR, growth restriction; GVHD, graft-versus-host disease; Ig, immunoglobulin; K, karyotype; N/A, not available; ND, not done; Plt, platelet count; TLM, telomere. Other abbreviations are explained in Tables 1-3.
SAMD9L homozygous mutation.