Impact of DNMT3A, TET2, or any mutation on blood formula and biological parameters
End point . | Covariates . | Trans. . | Mutation . | ![]() | SE . | P . | % Change . |
---|---|---|---|---|---|---|---|
WBC | Age + smoking | log10 | DNMT3A | 0.0142 | 0.0074 | .055 | 3.33 |
DNMT3A >10% | 0.0123 | 0.0111 | .269 | 2.87 | |||
DNMT3A VAF continuous | 0.0006 | 0.0004 | .186 | 0.13 | |||
TET2 | −0.0178 | 0.0098 | .070 | −4.02 | |||
TET2 >10% | −0.0265 | 0.0128 | .039 | −5.92 | |||
TET2 VAF continuous | −0.0005 | 0.0005 | .276 | −0.11 | |||
Any mutation | 0.0035 | 0.0061 | .565 | 0.81 | |||
Any mutation >10% | −0.0009 | 0.0084 | .910 | −0.22 | |||
Hemoglobin | Age + smoking | None | DNMT3A | 0.3321 | 0.6645 | .617 | 0.25 |
DNMT3A >10% | 1.8138 | 0.9933 | .068 | 1.36 | |||
DNMT3A VAF continuous | 0.0624 | 0.0390 | .110 | NA | |||
TET2 | −0.3903 | 0.8890 | .661 | −0.29 | |||
TET2 >10% | −0.9667 | 1.1561 | .403 | −0.73 | |||
TET2 VAF continuous | −0.0476 | 0.0411 | .247 | NA | |||
Any mutation | 0.6235 | 0.5467 | .254 | 0.47 | |||
Any mutation >10% | 1.1440 | 0.7468 | .126 | 0.86 | |||
Lymphocytes | Age + smoking | log10 | DNMT3A | 0.0085 | 0.0095 | .371 | 1.97 |
DNMT3A >10% | 0.0099 | 0.0142 | .486 | 2.30 | |||
DNMT3A VAF continuous | 0.0004 | 0.0006 | .475 | 0.09 | |||
TET2 | −0.0038 | 0.0127 | .763 | −0.88 | |||
TET2 >10% | −0.0112 | 0.0165 | .498 | −2.54 | |||
TET2 VAF continuous | −0.0001 | 0.0006 | .800 | −0.03 | |||
Any mutation | 0.0071 | 0.0078 | .364 | 1.65 | |||
Any mutation >10% | 0.0015 | 0.0107 | .885 | 0.35 | |||
Monocytes | Age + smoking | log10 | DNMT3A | 0.0061 | 0.0098 | .535 | 1.42 |
DNMT3A >10% | 0.0068 | 0.0148 | .644 | 1.59 | |||
DNMT3A VAF continuous | 0.0003 | 0.0006 | .630 | 0.07 | |||
TET2 | 0.0067 | 0.0132 | .614 | 1.54 | |||
TET2 >10% | −0.0038 | 0.0172 | .824 | −0.88 | |||
TET2 VAF continuous | 0.0015 | 0.0006 | .013 | 0.35 | |||
Any mutation | 0.0068 | 0.0082 | .405 | 1.58 | |||
Any mutation >10% | 0.0038 | 0.0112 | .737 | 0.87 | |||
Neutrophils | Age + smoking | log10 | DNMT3A | 0.0183 | 0.0096 | .057 | 4.30 |
DNMT3A >10% | 0.0122 | 0.0144 | .397 | 2.84 | |||
DNMT3A VAF continuous | 0.0006 | 0.0006 | .294 | 0.14 | |||
TET2 | −0.0303 | 0.0127 | .017 | −6.73 | |||
TET2 >10% | −0.0417 | 0.0166 | .012 | −9.15 | |||
TET2 VAF continuous | −0.0011 | 0.0006 | .053 | −0.26 | |||
Any mutation | 0.0007 | 0.0079 | .929 | 0.16 | |||
Any mutation >10% | −0.0058 | 0.0108 | .595 | −1.32 | |||
Platelets | Age | log10 | DNMT3A | 0.0014 | 0.0068 | .831 | 0.33 |
DNMT3A >10% | −0.0022 | 0.0102 | .827 | −0.51 | |||
DNMT3A VAF continuous | −0.0002 | 0.0004 | .702 | −0.03 | |||
TET2 | −0.0124 | 0.0092 | .175 | −2.82 | |||
TET2 >10% | −0.0256 | 0.0120 | .033 | −5.73 | |||
TET2 VAF continuous | −0.0008 | 0.0005 | .073 | −0.19 | |||
Any mutation | 0.0032 | 0.0056 | .572 | 0.73 | |||
Any mutation >10% | −0.0017 | 0.0077 | .829 | −0.38 | |||
MCV | Age + smoking | none | DNMT3A | −0.0710 | 0.2686 | .791 | −0.08 |
DNMT3A >10% | −0.4800 | 0.4034 | .234 | −0.52 | |||
DNMT3A VAF continuous | −0.0118 | 0.0157 | .455 | NA | |||
TET2 | −0.3377 | 0.3535 | .340 | −0.37 | |||
TET2 >10% | −0.7134 | 0.4616 | .123 | −0.78 | |||
TET2 VAF continuous | −0.0162 | 0.0163 | .320 | NA | |||
Any mutation | −0.0263 | 0.2192 | .905 | −0.03 | |||
Any mutation > 10% | −0.3206 | 0.3011 | .287 | −0.35 | |||
XCI ratio skewing | Age | none | DNMT3A | 0.0227 | 0.0114 | .046 | 9.56 |
DNMT3A >10% | 0.0707 | 0.0169 | 3.10E-05 | 29.84 | |||
DNMT3A VAF continuous | 0.0026 | 0.0006 | 5.67E-05 | NA | |||
TET2 | 0.0697 | 0.0144 | 1.55E-06 | 29.38 | |||
TET2 >10% | 0.0924 | 0.0187 | 9.55E-07 | 38.94 | |||
TET2 VAF continuous | 0.0034 | 0.0007 | 4.20E-07 | NA | |||
Any mutation | 0.0375 | 0.0092 | 4.76E-05 | 15.80 | |||
Any mutation >10% | 0.0746 | 0.0124 | 2.53E-09 | 31.42 | |||
Telomere length | Age | log10 | DNMT3A | −0.0104 | 0.0096 | .279 | −2.37 |
DNMT3A >10% | −0.0155 | 0.0147 | .292 | −3.51 | |||
DNMT3A VAF continuous | −0.0008 | 0.0006 | .143 | −0.19 | |||
TET2 | −0.0254 | 0.0129 | .049 | −5.68 | |||
TET2 >10% | −0.0073 | 0.0172 | .673 | −1.66 | |||
TET2 VAF continuous | −0.0010 | 0.0007 | .129 | −0.23 | |||
Any mutation | −0.0205 | 0.0079 | .010 | −4.60 | |||
Any mutation >10% | −0.0196 | 0.0110 | .076 | −4.40 |
End point . | Covariates . | Trans. . | Mutation . | ![]() | SE . | P . | % Change . |
---|---|---|---|---|---|---|---|
WBC | Age + smoking | log10 | DNMT3A | 0.0142 | 0.0074 | .055 | 3.33 |
DNMT3A >10% | 0.0123 | 0.0111 | .269 | 2.87 | |||
DNMT3A VAF continuous | 0.0006 | 0.0004 | .186 | 0.13 | |||
TET2 | −0.0178 | 0.0098 | .070 | −4.02 | |||
TET2 >10% | −0.0265 | 0.0128 | .039 | −5.92 | |||
TET2 VAF continuous | −0.0005 | 0.0005 | .276 | −0.11 | |||
Any mutation | 0.0035 | 0.0061 | .565 | 0.81 | |||
Any mutation >10% | −0.0009 | 0.0084 | .910 | −0.22 | |||
Hemoglobin | Age + smoking | None | DNMT3A | 0.3321 | 0.6645 | .617 | 0.25 |
DNMT3A >10% | 1.8138 | 0.9933 | .068 | 1.36 | |||
DNMT3A VAF continuous | 0.0624 | 0.0390 | .110 | NA | |||
TET2 | −0.3903 | 0.8890 | .661 | −0.29 | |||
TET2 >10% | −0.9667 | 1.1561 | .403 | −0.73 | |||
TET2 VAF continuous | −0.0476 | 0.0411 | .247 | NA | |||
Any mutation | 0.6235 | 0.5467 | .254 | 0.47 | |||
Any mutation >10% | 1.1440 | 0.7468 | .126 | 0.86 | |||
Lymphocytes | Age + smoking | log10 | DNMT3A | 0.0085 | 0.0095 | .371 | 1.97 |
DNMT3A >10% | 0.0099 | 0.0142 | .486 | 2.30 | |||
DNMT3A VAF continuous | 0.0004 | 0.0006 | .475 | 0.09 | |||
TET2 | −0.0038 | 0.0127 | .763 | −0.88 | |||
TET2 >10% | −0.0112 | 0.0165 | .498 | −2.54 | |||
TET2 VAF continuous | −0.0001 | 0.0006 | .800 | −0.03 | |||
Any mutation | 0.0071 | 0.0078 | .364 | 1.65 | |||
Any mutation >10% | 0.0015 | 0.0107 | .885 | 0.35 | |||
Monocytes | Age + smoking | log10 | DNMT3A | 0.0061 | 0.0098 | .535 | 1.42 |
DNMT3A >10% | 0.0068 | 0.0148 | .644 | 1.59 | |||
DNMT3A VAF continuous | 0.0003 | 0.0006 | .630 | 0.07 | |||
TET2 | 0.0067 | 0.0132 | .614 | 1.54 | |||
TET2 >10% | −0.0038 | 0.0172 | .824 | −0.88 | |||
TET2 VAF continuous | 0.0015 | 0.0006 | .013 | 0.35 | |||
Any mutation | 0.0068 | 0.0082 | .405 | 1.58 | |||
Any mutation >10% | 0.0038 | 0.0112 | .737 | 0.87 | |||
Neutrophils | Age + smoking | log10 | DNMT3A | 0.0183 | 0.0096 | .057 | 4.30 |
DNMT3A >10% | 0.0122 | 0.0144 | .397 | 2.84 | |||
DNMT3A VAF continuous | 0.0006 | 0.0006 | .294 | 0.14 | |||
TET2 | −0.0303 | 0.0127 | .017 | −6.73 | |||
TET2 >10% | −0.0417 | 0.0166 | .012 | −9.15 | |||
TET2 VAF continuous | −0.0011 | 0.0006 | .053 | −0.26 | |||
Any mutation | 0.0007 | 0.0079 | .929 | 0.16 | |||
Any mutation >10% | −0.0058 | 0.0108 | .595 | −1.32 | |||
Platelets | Age | log10 | DNMT3A | 0.0014 | 0.0068 | .831 | 0.33 |
DNMT3A >10% | −0.0022 | 0.0102 | .827 | −0.51 | |||
DNMT3A VAF continuous | −0.0002 | 0.0004 | .702 | −0.03 | |||
TET2 | −0.0124 | 0.0092 | .175 | −2.82 | |||
TET2 >10% | −0.0256 | 0.0120 | .033 | −5.73 | |||
TET2 VAF continuous | −0.0008 | 0.0005 | .073 | −0.19 | |||
Any mutation | 0.0032 | 0.0056 | .572 | 0.73 | |||
Any mutation >10% | −0.0017 | 0.0077 | .829 | −0.38 | |||
MCV | Age + smoking | none | DNMT3A | −0.0710 | 0.2686 | .791 | −0.08 |
DNMT3A >10% | −0.4800 | 0.4034 | .234 | −0.52 | |||
DNMT3A VAF continuous | −0.0118 | 0.0157 | .455 | NA | |||
TET2 | −0.3377 | 0.3535 | .340 | −0.37 | |||
TET2 >10% | −0.7134 | 0.4616 | .123 | −0.78 | |||
TET2 VAF continuous | −0.0162 | 0.0163 | .320 | NA | |||
Any mutation | −0.0263 | 0.2192 | .905 | −0.03 | |||
Any mutation > 10% | −0.3206 | 0.3011 | .287 | −0.35 | |||
XCI ratio skewing | Age | none | DNMT3A | 0.0227 | 0.0114 | .046 | 9.56 |
DNMT3A >10% | 0.0707 | 0.0169 | 3.10E-05 | 29.84 | |||
DNMT3A VAF continuous | 0.0026 | 0.0006 | 5.67E-05 | NA | |||
TET2 | 0.0697 | 0.0144 | 1.55E-06 | 29.38 | |||
TET2 >10% | 0.0924 | 0.0187 | 9.55E-07 | 38.94 | |||
TET2 VAF continuous | 0.0034 | 0.0007 | 4.20E-07 | NA | |||
Any mutation | 0.0375 | 0.0092 | 4.76E-05 | 15.80 | |||
Any mutation >10% | 0.0746 | 0.0124 | 2.53E-09 | 31.42 | |||
Telomere length | Age | log10 | DNMT3A | −0.0104 | 0.0096 | .279 | −2.37 |
DNMT3A >10% | −0.0155 | 0.0147 | .292 | −3.51 | |||
DNMT3A VAF continuous | −0.0008 | 0.0006 | .143 | −0.19 | |||
TET2 | −0.0254 | 0.0129 | .049 | −5.68 | |||
TET2 >10% | −0.0073 | 0.0172 | .673 | −1.66 | |||
TET2 VAF continuous | −0.0010 | 0.0007 | .129 | −0.23 | |||
Any mutation | −0.0205 | 0.0079 | .010 | −4.60 | |||
Any mutation >10% | −0.0196 | 0.0110 | .076 | −4.40 |
Correction for multiple testing (P < .0024).
, standardized regression coefficient; MCV, mean corpuscular volume; NA, not applicable; SE, standard error; Trans., transformation.