circRNA read support for structures and their frequency in all samples
circRNA reads . | Bladder . | Liver . | Skin . | Muscle . | Kidney . | Breast . | Prostate . | Brain . | Heart . | Ovary . | Lung . | Colon . | K562_1 . | GM12878_1 . | K562_2 . | GM12878_2 . | Fibroblasts_U1 . | Fibroblasts_U2 . | H9_D . | Fibroblasts_D1 . | Fibroblasts_D2 . | Platelet_F . | Platelet_M2 . | Platelet_M1 . | RBCs . |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
>10 | 55 | 308 | 164 | 136 | 196 | 186 | 71 | 670 | 235 | 263 | 521 | 190 | 3 | 9 | 11 | 6 | 125 | 141 | 227 | 2797 | 3052 | 7281 | 9605 | 8459 | 1272 |
>100 | 0 | 11 | 3 | 2 | 2 | 3 | 1 | 19 | 5 | 3 | 6 | 5 | 0 | 0 | 0 | 0 | 4 | 2 | 2 | 200 | 224 | 1197 | 1686 | 1325 | 96 |
>1000 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 5 | 83 | 147 | 95 | 2 |
K/M | 66 | 295 | 170 | 69 | 104 | 126 | 59 | 447 | 148 | 125 | 172 | 84 | 9 | 7 | 9 | 9 | 45 | 36 | 427 | 546 | 464 | 8469 | 11 138 | 7579 | 597 |
circRNA reads . | Bladder . | Liver . | Skin . | Muscle . | Kidney . | Breast . | Prostate . | Brain . | Heart . | Ovary . | Lung . | Colon . | K562_1 . | GM12878_1 . | K562_2 . | GM12878_2 . | Fibroblasts_U1 . | Fibroblasts_U2 . | H9_D . | Fibroblasts_D1 . | Fibroblasts_D2 . | Platelet_F . | Platelet_M2 . | Platelet_M1 . | RBCs . |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
>10 | 55 | 308 | 164 | 136 | 196 | 186 | 71 | 670 | 235 | 263 | 521 | 190 | 3 | 9 | 11 | 6 | 125 | 141 | 227 | 2797 | 3052 | 7281 | 9605 | 8459 | 1272 |
>100 | 0 | 11 | 3 | 2 | 2 | 3 | 1 | 19 | 5 | 3 | 6 | 5 | 0 | 0 | 0 | 0 | 4 | 2 | 2 | 200 | 224 | 1197 | 1686 | 1325 | 96 |
>1000 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 5 | 83 | 147 | 95 | 2 |
K/M | 66 | 295 | 170 | 69 | 104 | 126 | 59 | 447 | 148 | 125 | 172 | 84 | 9 | 7 | 9 | 9 | 45 | 36 | 427 | 546 | 464 | 8469 | 11 138 | 7579 | 597 |
For each sample, the number of distinct circRNA structures supported by >10, 100, and 1000 circRNA (back-splice) reads are shown, together with the number of circRNA reads per million reads (K/M).
D, digested with RNAse R; U, undigested, matched sample.