Table 1

Mechanisms of resistance to targeted agents

DiseaseTargeted therapyPrimary targetMechanisms of resistance
MutationalNonmutational
FLT3-mutated AML FLT3 inhibitors FLT3 receptor kinase domain Mutations that disrupt binding: A. Upregulation of prosurvival pathways: MEK/ERK, Pi3K/AKT, STAT5/PIM 
FLT3 activation loop residues (D835V/Y/F/H, D839G, Y842C/H) 
FLT3 gatekeeper residues (F691L/I) 
B. Upregulation of FLT3 receptor or FLT3 ligand 
C. Microenvironment/stroma-mediated resistance (CXCL12/CXCR4 signaling) 
D. Activation of antiapoptotic proteins (BCL2, MCL1) 
CLL BTK inhibitors BTK active site A. Mutations that disrupt binding:
BTK point mutations (C481S) 
A. Upregulation of prosurvival pathways including Pi3K/AKT 
B. Mutations producing BTK independent BCR pathway activation: PLCG2 mutations (R665W, L845F, S707Y) B. Activation of antiapoptotic proteins (BCL-2) 
CML Tyrosine kinase inhibitors BCR-ABL kinase domain Mutations that disrupt binding: A. Genomic amplification of BCR-ABL 
Activation loop residues (this includes P-loop, SH3 and SH2 contact, and A-loop mutations)* B. Clonal cytogenetic changes 
Gatekeeper residues (T315I/A, F317L/V/I/C) C. P-glycoprotein mediated drug efflux 
D. Alternative pathway signal activation (Src family kinases) 
E. Loss of functional P53 
APL Arsenic trioxide PML protein Mutations that disrupt binding:  
PML locus (A216V/T, S214L, L217F, S220G) 
RAR locus (G197E, R2831, M284V, D288E) 
Chronic eosinophilic leukemia Imatinib PDGFRA-FLIP1L1 tyrosine kinase Mutations that disrupt binding: ATP binding residues (T674I, D842V)  
DiseaseTargeted therapyPrimary targetMechanisms of resistance
MutationalNonmutational
FLT3-mutated AML FLT3 inhibitors FLT3 receptor kinase domain Mutations that disrupt binding: A. Upregulation of prosurvival pathways: MEK/ERK, Pi3K/AKT, STAT5/PIM 
FLT3 activation loop residues (D835V/Y/F/H, D839G, Y842C/H) 
FLT3 gatekeeper residues (F691L/I) 
B. Upregulation of FLT3 receptor or FLT3 ligand 
C. Microenvironment/stroma-mediated resistance (CXCL12/CXCR4 signaling) 
D. Activation of antiapoptotic proteins (BCL2, MCL1) 
CLL BTK inhibitors BTK active site A. Mutations that disrupt binding:
BTK point mutations (C481S) 
A. Upregulation of prosurvival pathways including Pi3K/AKT 
B. Mutations producing BTK independent BCR pathway activation: PLCG2 mutations (R665W, L845F, S707Y) B. Activation of antiapoptotic proteins (BCL-2) 
CML Tyrosine kinase inhibitors BCR-ABL kinase domain Mutations that disrupt binding: A. Genomic amplification of BCR-ABL 
Activation loop residues (this includes P-loop, SH3 and SH2 contact, and A-loop mutations)* B. Clonal cytogenetic changes 
Gatekeeper residues (T315I/A, F317L/V/I/C) C. P-glycoprotein mediated drug efflux 
D. Alternative pathway signal activation (Src family kinases) 
E. Loss of functional P53 
APL Arsenic trioxide PML protein Mutations that disrupt binding:  
PML locus (A216V/T, S214L, L217F, S220G) 
RAR locus (G197E, R2831, M284V, D288E) 
Chronic eosinophilic leukemia Imatinib PDGFRA-FLIP1L1 tyrosine kinase Mutations that disrupt binding: ATP binding residues (T674I, D842V)  
*

Supplemental Figure 1 provides detailed information regarding activation loop mutations in CML.

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