Table 3

List of 50 genes regulated by IL-4 in both resident and monocyte-derived macrophages

Gene symbolDescriptionFold change*
AA467197 Expressed sequence AA467197 367.4197 
Chi3l4 Chitinase-like 4 or Ym2 310.8889 
Aqp3 Aquaporin 3 156.1061 
Ddx4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 127.3663 
Ear11 Eosinophil-associated, ribonuclease A family, member 11 96.4100 
Ear10 Eosinophil-associated, ribonuclease A family, member 10 88.2232 
Cst7 Cystatin F (leukocystatin) 86.1656 
Tuba8 Tubulin, α 8 58.8395 
Ear12 Eosinophil-associated, ribonuclease A family, member 12 46.9911 
Asns Asparagine synthetase 46.9515 
Chi3l3 Chitinase-like 3 or Ym1 44.8807 
Cdh1 Cadherin 1 44.7643 
Cish Cytokine inducible SH2-containing protein 33.5730 
Gm4610 Predicted gene 4610 28.9111 
Gm6756 Predicted gene 6756 28.5975 
Gfra2 Glial cell line derived neurotrophic factor family receptor α 2 28.3951 
Phgdh 3-Phosphoglycerate dehydrogenase 28.1069 
Slc7a2 Solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 27.6141 
Gm5150 Predicted gene 5150 26.6933 
A530064D06Rik RIKEN cDNA A530064D06 gene 26.5447 
Ear2 Eosinophil-associated, ribonuclease A family, member 2 25.9995 
Gatm Glycine amidinotransferase (l-arginine:glycine amidinotransferase) 25.6794 
Pi16 Peptidase inhibitor 16 23.3797 
Flt1 FMS-like tyrosine kinase 1 23.0790 
Fbp1 Fructose bisphosphatase 1 22.4783 
Apoe Apolipoprotein E 0.0499 
Clec4d C-type lectin domain family 4, member d 0.0532 
Apoc2 Apolipoprotein C-II 0.0551 
Atf7 Activating transcription factor 7 0.0663 
Irf8 Interferon regulatory factor 8 0.0682 
Gm11538 Predicted gene 11538 0.0778 
Fcgr1 Fc receptor, IgG, high affinity I 0.0858 
Rgs1 Regulator of G-protein signaling 1 0.0877 
Ccl3 Chemokine (C-C motif) ligand 3 0.0880 
Prom1 Prominin 1 0.0982 
Gm1673 Predicted gene 1673 0.1016 
Cdkn1c Cyclin-dependent kinase inhibitor 1C (P57) 0.1045 
Olfr871 Olfactory receptor 871 0.1055 
Neurl3 Neuralized homolog 3 homolog (Drosophila) 0.1063 
Lyz2 Lysozyme 2 0.1138 
Itgb5 Integrin β 5 0.1160 
Lst1 Leukocyte specific transcript 1 0.1253 
Rnf150 Ring finger protein 150 0.1274 
Itga6 Integrin α 6 0.1277 
Cnrip1 Cannabinoid receptor interacting protein 1 0.1286 
Abca1 ATP-binding cassette, sub-family A (ABC1), member 1 0.1294 
Cbr2 Carbonyl reductase 2 0.1316 
1700003F12Rik RIKEN cDNA 1700003F12 gene 0.1339 
Lmo2 LIM domain only 2 0.1416 
Ldhb Lactate dehydrogenase B 0.1431 
Gene symbolDescriptionFold change*
AA467197 Expressed sequence AA467197 367.4197 
Chi3l4 Chitinase-like 4 or Ym2 310.8889 
Aqp3 Aquaporin 3 156.1061 
Ddx4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 127.3663 
Ear11 Eosinophil-associated, ribonuclease A family, member 11 96.4100 
Ear10 Eosinophil-associated, ribonuclease A family, member 10 88.2232 
Cst7 Cystatin F (leukocystatin) 86.1656 
Tuba8 Tubulin, α 8 58.8395 
Ear12 Eosinophil-associated, ribonuclease A family, member 12 46.9911 
Asns Asparagine synthetase 46.9515 
Chi3l3 Chitinase-like 3 or Ym1 44.8807 
Cdh1 Cadherin 1 44.7643 
Cish Cytokine inducible SH2-containing protein 33.5730 
Gm4610 Predicted gene 4610 28.9111 
Gm6756 Predicted gene 6756 28.5975 
Gfra2 Glial cell line derived neurotrophic factor family receptor α 2 28.3951 
Phgdh 3-Phosphoglycerate dehydrogenase 28.1069 
Slc7a2 Solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 27.6141 
Gm5150 Predicted gene 5150 26.6933 
A530064D06Rik RIKEN cDNA A530064D06 gene 26.5447 
Ear2 Eosinophil-associated, ribonuclease A family, member 2 25.9995 
Gatm Glycine amidinotransferase (l-arginine:glycine amidinotransferase) 25.6794 
Pi16 Peptidase inhibitor 16 23.3797 
Flt1 FMS-like tyrosine kinase 1 23.0790 
Fbp1 Fructose bisphosphatase 1 22.4783 
Apoe Apolipoprotein E 0.0499 
Clec4d C-type lectin domain family 4, member d 0.0532 
Apoc2 Apolipoprotein C-II 0.0551 
Atf7 Activating transcription factor 7 0.0663 
Irf8 Interferon regulatory factor 8 0.0682 
Gm11538 Predicted gene 11538 0.0778 
Fcgr1 Fc receptor, IgG, high affinity I 0.0858 
Rgs1 Regulator of G-protein signaling 1 0.0877 
Ccl3 Chemokine (C-C motif) ligand 3 0.0880 
Prom1 Prominin 1 0.0982 
Gm1673 Predicted gene 1673 0.1016 
Cdkn1c Cyclin-dependent kinase inhibitor 1C (P57) 0.1045 
Olfr871 Olfactory receptor 871 0.1055 
Neurl3 Neuralized homolog 3 homolog (Drosophila) 0.1063 
Lyz2 Lysozyme 2 0.1138 
Itgb5 Integrin β 5 0.1160 
Lst1 Leukocyte specific transcript 1 0.1253 
Rnf150 Ring finger protein 150 0.1274 
Itga6 Integrin α 6 0.1277 
Cnrip1 Cannabinoid receptor interacting protein 1 0.1286 
Abca1 ATP-binding cassette, sub-family A (ABC1), member 1 0.1294 
Cbr2 Carbonyl reductase 2 0.1316 
1700003F12Rik RIKEN cDNA 1700003F12 gene 0.1339 
Lmo2 LIM domain only 2 0.1416 
Ldhb Lactate dehydrogenase B 0.1431 
*

Calculated as average fold change of genes regulated by IL-4 in resident macrophage and genes regulated by IL-4 in monocyte-derived macrophages.

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