Gene set enrichment analysis of CD14– fibrocytes vs CD14+ macrophages
| GSEA gene set . | Exp # . | NES . | % Overlap with gene set . | FDR . | P value . |
|---|---|---|---|---|---|
| Lindstedt DC Maturation C (66 genes) | 1 | −2.7 (1st) | 74 | 0.000 | .000 |
| 2 | −2.6 (1st) | 79 | 0.000 | .000 | |
| 3 | −2.6 (1st) | 62 | 0.000 | .000 | |
| Rutella response to HGF (236 genes) | 1 | −2.6 (2nd) | 48 | 0.000 | .000 |
| 2 | −2.3 (3rd) | 50 | 0.000 | .000 | |
| 3 | −2.2 (9th) | 37 | 0.000 | .000 | |
| Lindstedt DC Maturation B (50 genes) | 1 | −2.4 (3rd) | 64 | 0.000 | .000 |
| 2 | −2.2 (4th) | 54 | 0.000 | .000 | |
| 3 | −2.2 (7th) | 44 | 0.000 | .000 |
| GSEA gene set . | Exp # . | NES . | % Overlap with gene set . | FDR . | P value . |
|---|---|---|---|---|---|
| Lindstedt DC Maturation C (66 genes) | 1 | −2.7 (1st) | 74 | 0.000 | .000 |
| 2 | −2.6 (1st) | 79 | 0.000 | .000 | |
| 3 | −2.6 (1st) | 62 | 0.000 | .000 | |
| Rutella response to HGF (236 genes) | 1 | −2.6 (2nd) | 48 | 0.000 | .000 |
| 2 | −2.3 (3rd) | 50 | 0.000 | .000 | |
| 3 | −2.2 (9th) | 37 | 0.000 | .000 | |
| Lindstedt DC Maturation B (50 genes) | 1 | −2.4 (3rd) | 64 | 0.000 | .000 |
| 2 | −2.2 (4th) | 54 | 0.000 | .000 | |
| 3 | −2.2 (7th) | 44 | 0.000 | .000 |
NES, normalized enrichment score (rank in all gene sets evaluated for the experiment); FDR, false discovery rate HGF, Hepatocyte Growth Factor.