Table 3

CPL scan parameters

CPL IDSequence of position one sublibrariesTotal no. of peptides in library (a + 19) × 19nNo. of sublibrariesNo. of peptides in each sublibrary (19n)Concentration of each peptide in sublibrary*
8mer OXXXXXXX 2.4 × 1010 160 8.9 × 108 1.1 × 10−13
9mer OXXXXXXXX 4.8 × 1011 180 1.7 × 1010 5.9 × 10−15
10mer OXXXXXXXXX 9.4 × 1012 200 3.2 × 1011 3.1 × 10−16
11mer OXXXXXXXXXX 1.8 × 1014 220 6.1 × 1012 1.6 × 10−17
12mer OXXXXXXXXXXX 3.6 × 1015 240 1.2 × 1014 8.6 × 10−19
13mer OXXXXXXXXXXXX 7.1 × 1016 260 2.2 × 1015 4.5 × 10−20
CPL IDSequence of position one sublibrariesTotal no. of peptides in library (a + 19) × 19nNo. of sublibrariesNo. of peptides in each sublibrary (19n)Concentration of each peptide in sublibrary*
8mer OXXXXXXX 2.4 × 1010 160 8.9 × 108 1.1 × 10−13
9mer OXXXXXXXX 4.8 × 1011 180 1.7 × 1010 5.9 × 10−15
10mer OXXXXXXXXX 9.4 × 1012 200 3.2 × 1011 3.1 × 10−16
11mer OXXXXXXXXXX 1.8 × 1014 220 6.1 × 1012 1.6 × 10−17
12mer OXXXXXXXXXXX 3.6 × 1015 240 1.2 × 1014 8.6 × 10−19
13mer OXXXXXXXXXXXX 7.1 × 1016 260 2.2 × 1015 4.5 × 10−20

n indicates the number of degenerate positions; O, fixed sequence position (1 of the 20 proteogenic L-amino acids; O is moved systematically through the peptide backbone in a full CPL); X, degenerate position (1 of 19 proteogenic L-amino acids, excluding cysteine); and a, full peptide length.

*

When mixtures are used at a concentration of 100μM.

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