Reassignment of incorrectly assigned transcripts to proteome data
| Protein . | Name . | qMS protein copies . | RNAseq (Trizol) . | RNAseq (column) . |
|---|---|---|---|---|
| P24844 | MYL9 | 66 201.00 | 1075.77 | 470.75 |
| P07359 | GP1BA | 17 878.00 | 198.00 | 56.93 |
| P78417 | GSTO1 | 44 394.00 | 173.23 | 43.36 |
| P59998 | ARPC4 | 23 521.00 | 168.27 | 28.86 |
| Q99952 | PTPN18 | 674.00 | 109.61 | 43.89 |
| P01893 | HLA-H | 1.00 | 48.55 | 13.68 |
| P09496 | CLTA | 3072.00 | 17.14 | 4.56 |
| Q9UP65 | PLA2G4C | 289.00 | 8.10 | 0.83 |
| A6QL63 | BTBD11 | 399.00 | 6.04 | 2.73 |
| O95139 | NDUFB6 | 968.00 | 3.69 | 0.39 |
| Q63HN8 | RNF213 | 364.00 | 3.57 | 1.14 |
| Q5VYK3 | KIAA0368 | 1623.00 | 3.36 | 0.35 |
| Q96J02 | ITCH | 472.00 | 1.98 | 0.13 |
| Q99460 | PSMD1 | 2219.00 | 1.97 | 0.29 |
| O75521 | PECI | 767.00 | 1.89 | 0.00 |
| O75167 | PHACTR2 | 388.00 | 1.88 | 0.43 |
| O00499 | BIN1 | 1.00 | 1.78 | 0.00 |
| P45984 | MAPK9 | 1213.00 | 1.68 | 0.24 |
| Q6YHK3 | CD109 | 1781.00 | 1.52 | 0.87 |
| Q5XPI4 | RNF123 | 312.00 | 1.48 | 0.23 |
| Q9H8M7 | FAM188A | 340.00 | 1.38 | 0.12 |
| Q8WYN0 | ATG4A | 668.00 | 1.01 | 0.00 |
| Q92696 | RABGGTA | 1534.00 | 0.99 | 0.24 |
| P63096 | GNAI1 | 10 443.00 | 0.99 | 0.65 |
| Protein . | Name . | qMS protein copies . | RNAseq (Trizol) . | RNAseq (column) . |
|---|---|---|---|---|
| P24844 | MYL9 | 66 201.00 | 1075.77 | 470.75 |
| P07359 | GP1BA | 17 878.00 | 198.00 | 56.93 |
| P78417 | GSTO1 | 44 394.00 | 173.23 | 43.36 |
| P59998 | ARPC4 | 23 521.00 | 168.27 | 28.86 |
| Q99952 | PTPN18 | 674.00 | 109.61 | 43.89 |
| P01893 | HLA-H | 1.00 | 48.55 | 13.68 |
| P09496 | CLTA | 3072.00 | 17.14 | 4.56 |
| Q9UP65 | PLA2G4C | 289.00 | 8.10 | 0.83 |
| A6QL63 | BTBD11 | 399.00 | 6.04 | 2.73 |
| O95139 | NDUFB6 | 968.00 | 3.69 | 0.39 |
| Q63HN8 | RNF213 | 364.00 | 3.57 | 1.14 |
| Q5VYK3 | KIAA0368 | 1623.00 | 3.36 | 0.35 |
| Q96J02 | ITCH | 472.00 | 1.98 | 0.13 |
| Q99460 | PSMD1 | 2219.00 | 1.97 | 0.29 |
| O75521 | PECI | 767.00 | 1.89 | 0.00 |
| O75167 | PHACTR2 | 388.00 | 1.88 | 0.43 |
| O00499 | BIN1 | 1.00 | 1.78 | 0.00 |
| P45984 | MAPK9 | 1213.00 | 1.68 | 0.24 |
| Q6YHK3 | CD109 | 1781.00 | 1.52 | 0.87 |
| Q5XPI4 | RNF123 | 312.00 | 1.48 | 0.23 |
| Q9H8M7 | FAM188A | 340.00 | 1.38 | 0.12 |
| Q8WYN0 | ATG4A | 668.00 | 1.01 | 0.00 |
| Q92696 | RABGGTA | 1534.00 | 0.99 | 0.24 |
| P63096 | GNAI1 | 10 443.00 | 0.99 | 0.65 |
The MS copy numbers and RNAseq data were merged after reassigning the identifiers. Only the combinations for proteome and transcriptome data for RPKM > 1, which were newly found in addition to the published data1 are shown.
MS, mass spectometry; qMS, quantified by MS.