Identification of potential downstream target genes of SOX4 in ATL
| Name . | Gene symbol . | Fold change . | Probe set . |
|---|---|---|---|
| MARCKS-like protein 1 (MARCKS-related protein) | MARCKSL1 (MRP) | 4.5 | 200644_at |
| Aquaporin 3 | AQP3 | 4.3 | 203747_at |
| Chondroitin sulfate N-acetylgalactosaminyltransferase 2 | CSGALNACT2 | 3.8 | 218871_x_at |
| Transmembrane emp24 protein transport domain containing 9 | TMED9 | 3.3 | 208757_at |
| Dedicator of cytokinesis 11 | DOCK11 | 3.3 | 238356_at |
| Poly (ADP-ribose) polymerase family, member 6 | PARP6 | 3.3 | 234710_s_at |
| Wolf-Hirschhorn syndrome candidate 2 | WHSC2 | 3.2 | 203112_s_at |
| AE-binding protein 2 | AEBP2 | 3.2 | 225889_at |
| SEC16 homolog B (S cerevisiae) | SEC16B | 3.0 | 1564423_a_at |
| Kelch-like 23 (Drosophila) | KLHL23 | 3.0 | 213610_s_at |
| Superoxide dismutase 2, mitochondrial | SOD2 | 2.9 | 221477_s_at |
| Heparan sulfate 2-O-sulfotransferase 1 | HS2ST1 | 2.9 | 203285_s_at |
| Armadillo repeat containing, X-linked 4 | ARMCX4 | 2.9 | 227444_at |
| Solute carrier family 4, sodium bicarbonate cotransporter, member 7 | SLC4A7 | 2.8 | 209884_s_at |
| RAP1 interacting factor homolog (yeast) | RIF1 | 2.8 | 214700_x_at |
| ArfGAP with FG repeats 2 | AGFG2 | 2.7 | 222126_at |
| AT-rich interactive domain 1B (SWI1-like) | ARID1B | 2.7 | 225181_at |
| Calpain 1, (μ/I) large subunit | CAPN1 | 2.7 | 200752_s_at |
| Ligand of numb-protein × 2 | LNX2 | 2.7 | 227569_at |
| Family with sequence similarity 189, member B | FAM189B | 2.6 | 203550_s_at |
| Major histocompatibility complex, class II, DQ β 1 | HLA-DQB1 | 2.6 | 211656_x_at |
| Tax1 (human T-cell leukemia virus type I) binding protein 3 | TAX1BP3 | 2.6 | 215464_s_at |
| Mitogen-activated protein kinase kinase kinase kinase 5 (germinal center kinase related) | MAP4K5 (GCKR) | 2.6 | 203552_at |
| RAB6A, member RAS oncogene family | RAB6A | 2.6 | 201048_x_at |
| Myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 | MLLT4 | 2.6 | 224685_at |
| Homeobox B7 | HOXB7 | 2.6 | 204779_s_at |
| 5-azacytidine induced 2 (NAK-associated protein 1) | AZI2 (NAP1) | 2.6 | 227904_at |
| Histone deacetylase 8 | HDAC8 | 2.6 | 223345_at |
| Hemoglobin, ε 1 | HBE1 | 2.5 | 205919_at |
| fem-1 homolog c (C. elegans) | FEM1C | 2.5 | 213341_at |
| COMM domain containing 5 | COMMD5 | 2.5 | 224387_at |
| Solute carrier family 44, member 2 | SLC44A2 | 2.5 | 224609_at |
| Matrin 3 | MATR3 | 2.4 | 242260_at |
| Tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) | TFPI | 2.4 | 210664_s_at |
| Protein phosphatase 1, catalytic subunit, β isozyme | PPP1CB | 2.4 | 201408_at |
| β-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) | B3GAT3 | 2.4 | 203452_at |
| Pyroglutamyl-peptidase I | PGPEP1 | 2.4 | 219891_at |
| ADP-ribosylation factor–like 1 | ARL1 | 2.4 | 201657_at |
| Taxilin γ | TXLNG | 2.4 | 219969_at |
| Acyl-CoA synthetase family member 3 | ACSF3 | 2.4 | 1556552_a_at |
| Retinol dehydrogenase 11 (all-trans/9-cis/11-cis) | RDH11 | 2.4 | 217776_at |
| Ataxin 7–like 1 | ATXN7L1 | 2.4 | 227732_at |
| Adaptor-related protein complex 3, δ 1 subunit | AP3D1 | 2.4 | 210974_s_at |
| Nucleoporin 160 kDa | NUP160 | 2.4 | 214963_at |
| Discs, large (Drosophila) homolog-associated protein 4 | DLGAP4 | 2.4 | 202572_s_at |
| Heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 | HS3ST3B1 | 2.4 | 1561908_a_at |
| AP2-associated kinase 1 | AAK1 | 2.3 | 205434_s_at |
| Insulin-induced gene 1 | INSIG1 | 2.3 | 201625_s_at |
| Calponin 2 | CNN2 | 2.3 | 201605_x_at |
| Polymerase (RNA) mitochondrial (DNA directed) | POLRMT | 2.3 | 203783_x_at |
| Name . | Gene symbol . | Fold change . | Probe set . |
|---|---|---|---|
| MARCKS-like protein 1 (MARCKS-related protein) | MARCKSL1 (MRP) | 4.5 | 200644_at |
| Aquaporin 3 | AQP3 | 4.3 | 203747_at |
| Chondroitin sulfate N-acetylgalactosaminyltransferase 2 | CSGALNACT2 | 3.8 | 218871_x_at |
| Transmembrane emp24 protein transport domain containing 9 | TMED9 | 3.3 | 208757_at |
| Dedicator of cytokinesis 11 | DOCK11 | 3.3 | 238356_at |
| Poly (ADP-ribose) polymerase family, member 6 | PARP6 | 3.3 | 234710_s_at |
| Wolf-Hirschhorn syndrome candidate 2 | WHSC2 | 3.2 | 203112_s_at |
| AE-binding protein 2 | AEBP2 | 3.2 | 225889_at |
| SEC16 homolog B (S cerevisiae) | SEC16B | 3.0 | 1564423_a_at |
| Kelch-like 23 (Drosophila) | KLHL23 | 3.0 | 213610_s_at |
| Superoxide dismutase 2, mitochondrial | SOD2 | 2.9 | 221477_s_at |
| Heparan sulfate 2-O-sulfotransferase 1 | HS2ST1 | 2.9 | 203285_s_at |
| Armadillo repeat containing, X-linked 4 | ARMCX4 | 2.9 | 227444_at |
| Solute carrier family 4, sodium bicarbonate cotransporter, member 7 | SLC4A7 | 2.8 | 209884_s_at |
| RAP1 interacting factor homolog (yeast) | RIF1 | 2.8 | 214700_x_at |
| ArfGAP with FG repeats 2 | AGFG2 | 2.7 | 222126_at |
| AT-rich interactive domain 1B (SWI1-like) | ARID1B | 2.7 | 225181_at |
| Calpain 1, (μ/I) large subunit | CAPN1 | 2.7 | 200752_s_at |
| Ligand of numb-protein × 2 | LNX2 | 2.7 | 227569_at |
| Family with sequence similarity 189, member B | FAM189B | 2.6 | 203550_s_at |
| Major histocompatibility complex, class II, DQ β 1 | HLA-DQB1 | 2.6 | 211656_x_at |
| Tax1 (human T-cell leukemia virus type I) binding protein 3 | TAX1BP3 | 2.6 | 215464_s_at |
| Mitogen-activated protein kinase kinase kinase kinase 5 (germinal center kinase related) | MAP4K5 (GCKR) | 2.6 | 203552_at |
| RAB6A, member RAS oncogene family | RAB6A | 2.6 | 201048_x_at |
| Myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 | MLLT4 | 2.6 | 224685_at |
| Homeobox B7 | HOXB7 | 2.6 | 204779_s_at |
| 5-azacytidine induced 2 (NAK-associated protein 1) | AZI2 (NAP1) | 2.6 | 227904_at |
| Histone deacetylase 8 | HDAC8 | 2.6 | 223345_at |
| Hemoglobin, ε 1 | HBE1 | 2.5 | 205919_at |
| fem-1 homolog c (C. elegans) | FEM1C | 2.5 | 213341_at |
| COMM domain containing 5 | COMMD5 | 2.5 | 224387_at |
| Solute carrier family 44, member 2 | SLC44A2 | 2.5 | 224609_at |
| Matrin 3 | MATR3 | 2.4 | 242260_at |
| Tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) | TFPI | 2.4 | 210664_s_at |
| Protein phosphatase 1, catalytic subunit, β isozyme | PPP1CB | 2.4 | 201408_at |
| β-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) | B3GAT3 | 2.4 | 203452_at |
| Pyroglutamyl-peptidase I | PGPEP1 | 2.4 | 219891_at |
| ADP-ribosylation factor–like 1 | ARL1 | 2.4 | 201657_at |
| Taxilin γ | TXLNG | 2.4 | 219969_at |
| Acyl-CoA synthetase family member 3 | ACSF3 | 2.4 | 1556552_a_at |
| Retinol dehydrogenase 11 (all-trans/9-cis/11-cis) | RDH11 | 2.4 | 217776_at |
| Ataxin 7–like 1 | ATXN7L1 | 2.4 | 227732_at |
| Adaptor-related protein complex 3, δ 1 subunit | AP3D1 | 2.4 | 210974_s_at |
| Nucleoporin 160 kDa | NUP160 | 2.4 | 214963_at |
| Discs, large (Drosophila) homolog-associated protein 4 | DLGAP4 | 2.4 | 202572_s_at |
| Heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 | HS3ST3B1 | 2.4 | 1561908_a_at |
| AP2-associated kinase 1 | AAK1 | 2.3 | 205434_s_at |
| Insulin-induced gene 1 | INSIG1 | 2.3 | 201625_s_at |
| Calponin 2 | CNN2 | 2.3 | 201605_x_at |
| Polymerase (RNA) mitochondrial (DNA directed) | POLRMT | 2.3 | 203783_x_at |