Table 1

Active miRNA families in GMPs

Fold enrichment*P*No. of transcripts regulatedNo. of regulated transcripts linked to lineage-affiliated signatures
let-7b/c/d/e/g/i 1.84 2.452 × 10−03 55 9 (16.4%) 
miR-10a 2.42 1.388 × 10−02 16 3 (18.8%) 
miR-15/16/195 1.65 1.032 × 10−02 57 8 (14%) 
miR-17/20/93/106 2.82 2.787 × 10−10 83 15 (18.1%) 
miR-19a/b 1.93 6.528 × 10−04 60 15 (25%) 
miR-25/92 2.37 1.657 × 10−05 54 12 (22.2%) 
miR-26a/b 1.80 8.623 × 10−03 45 10 (22.2%) 
miR-27a/b 1.79 2.452 × 10−03 59 12 (20.3%) 
miR-30a/b/d/e 1.82 1.073 × 10−03 69 14 (20.3%) 
miR-130b/301a 1.64 2.679 × 10−02 42 8 (19%) 
miR-142-3p 4.02 2.073 × 10−08 36 10 (27.8%) 
miR-181a/c 1.71 9.031 × 10−03 52 14 (26.9%) 
miR-200c 1.68 9.828 × 10−03 53 9 (17%) 
miR-203 1.86 1.388 × 10−02 33 5 (15.2%) 
miR-222 2.30 9.025 × 10−03 21 5 (23.8%) 
miR-223 2.19 2.547 × 10−02 17 4 (23.5%) 
miR-320 2.27 4.134 × 10−04 42 5 (11.9%) 
miR-340-5p 1.82 1.525 × 10−03 64 7 (10.9%) 
miR-494 2.35 4.099 × 10−03 24 5 (20.8%) 
miR-503 2.23 9.025 × 10−03 23 2 (8.7%) 
Fold enrichment*P*No. of transcripts regulatedNo. of regulated transcripts linked to lineage-affiliated signatures
let-7b/c/d/e/g/i 1.84 2.452 × 10−03 55 9 (16.4%) 
miR-10a 2.42 1.388 × 10−02 16 3 (18.8%) 
miR-15/16/195 1.65 1.032 × 10−02 57 8 (14%) 
miR-17/20/93/106 2.82 2.787 × 10−10 83 15 (18.1%) 
miR-19a/b 1.93 6.528 × 10−04 60 15 (25%) 
miR-25/92 2.37 1.657 × 10−05 54 12 (22.2%) 
miR-26a/b 1.80 8.623 × 10−03 45 10 (22.2%) 
miR-27a/b 1.79 2.452 × 10−03 59 12 (20.3%) 
miR-30a/b/d/e 1.82 1.073 × 10−03 69 14 (20.3%) 
miR-130b/301a 1.64 2.679 × 10−02 42 8 (19%) 
miR-142-3p 4.02 2.073 × 10−08 36 10 (27.8%) 
miR-181a/c 1.71 9.031 × 10−03 52 14 (26.9%) 
miR-200c 1.68 9.828 × 10−03 53 9 (17%) 
miR-203 1.86 1.388 × 10−02 33 5 (15.2%) 
miR-222 2.30 9.025 × 10−03 21 5 (23.8%) 
miR-223 2.19 2.547 × 10−02 17 4 (23.5%) 
miR-320 2.27 4.134 × 10−04 42 5 (11.9%) 
miR-340-5p 1.82 1.525 × 10−03 64 7 (10.9%) 
miR-494 2.35 4.099 × 10−03 24 5 (20.8%) 
miR-503 2.23 9.025 × 10−03 23 2 (8.7%) 
*

The fold enrichment and FDR-corrected P values of predicted targets in the fraction that are significantly up-regulated in DicerΔ/Δ cells compared with the nonregulated targets. Only the significant results (P < .05) of the miRNAs that are expressed in GMPs are shown. The lineage-affiliated signatures are shown in supplemental Table 4.

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