Table 1

Proteins detected with higher relative abundance in association with dephosphorylated S21 C/EBPα–FLAG/HA multicomponent complexes

Protein descriptionAccession no.Gene nameExperiments detected, nRatio, Inh/dmsoLog ratio, Inh/dmso
Protein SET isoform 2 gi 170763498 SET 3.0 0.477 
Antigen KI-67 isoform 1 gi 103472005 MKI67 2.0 0.309 
Transformer-2 protein homolog beta gi 4759098 SFRS10 2.0 0.292 
Transcription elongation factor SPT6 gi 27597090 SUPT6H 1.8 0.261 
Peptidyl-prolyl cis-trans isomerase B precursor gi 4758950 PPIB 1.7 0.241 
Histone H2A type 1 gi 4504239 HIST1H2AI 1.7 0.240 
Poly (ADP-ribose) polymerase 1 gi 156523968 PARP1 1.7 0.239 
Serine/arginine-rich splicing factor 1 isoform 1 gi 5902076 SFRS1 1.7 0.221 
Chromobox protein homolog 5 gi 6912292 CBX5 1.7 0.219 
Protein DEK isoform 1 gi 4503249 DEK 1.6 0.212 
Nucleolin gi 55956788 NCL 1.6 0.210 
Nucleolar RNA helicase 2 gi 50659095 DDX21 1.6 0.207 
Chromobox protein homolog 1 gi 5803076 CBX1 1.6 0.203 
Protein ELYS gi 262359929 AHCTF1 1.6 0.202 
Peptidyl-prolyl cis-trans isomerase A gi 10863927 PPIA 1.6 0.198 
CCAAT/enhancer binding protein alpha gi 28872794 CEBPA 0.9 −0.051 
Protein descriptionAccession no.Gene nameExperiments detected, nRatio, Inh/dmsoLog ratio, Inh/dmso
Protein SET isoform 2 gi 170763498 SET 3.0 0.477 
Antigen KI-67 isoform 1 gi 103472005 MKI67 2.0 0.309 
Transformer-2 protein homolog beta gi 4759098 SFRS10 2.0 0.292 
Transcription elongation factor SPT6 gi 27597090 SUPT6H 1.8 0.261 
Peptidyl-prolyl cis-trans isomerase B precursor gi 4758950 PPIB 1.7 0.241 
Histone H2A type 1 gi 4504239 HIST1H2AI 1.7 0.240 
Poly (ADP-ribose) polymerase 1 gi 156523968 PARP1 1.7 0.239 
Serine/arginine-rich splicing factor 1 isoform 1 gi 5902076 SFRS1 1.7 0.221 
Chromobox protein homolog 5 gi 6912292 CBX5 1.7 0.219 
Protein DEK isoform 1 gi 4503249 DEK 1.6 0.212 
Nucleolin gi 55956788 NCL 1.6 0.210 
Nucleolar RNA helicase 2 gi 50659095 DDX21 1.6 0.207 
Chromobox protein homolog 1 gi 5803076 CBX1 1.6 0.203 
Protein ELYS gi 262359929 AHCTF1 1.6 0.202 
Peptidyl-prolyl cis-trans isomerase A gi 10863927 PPIA 1.6 0.198 
CCAAT/enhancer binding protein alpha gi 28872794 CEBPA 0.9 −0.051 

For reference, data for C/EBPα are listed in the last row. Detected protein ratio in inhibitor-treated cells versus control is denoted as Inh/dmso.

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