Distribution of PROCR rs867186 genotypes among cases and non-cases in studies of VTE and MI
Included study* . | AA genotype . | AG genotype . | GG genotype . | MAF† . | Deviation from Hardy-Weinberg equilibrium . | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cases . | Non-cases . | Cases . | Non-cases . | Cases . | Non-cases . | ||||||||||
n . | % . | n . | % . | n . | % . | n . | % . | n . | % . | n . | % . | χ2P value . | REH (95% CI)‡ . | ||
VTE | |||||||||||||||
Medina 200417 | 291 | 82 | 327 | 82 | 62 | 17 | 74 | 18 | 2 | 1 | 0 | 0 | 0.09 | .04 | |
Saposnik 200435 | 249 | 74 | 278 | 82 | 85 | 25 | 58 | 17 | 4 | 1 | 2 | 1 | 0.09 | .58 | 1.23 (0.59-2.58) |
Uitte de Willige 200410 | 345 | 73 | 361 | 77 | 116 | 25 | 100 | 21 | 10 | 2 | 10 | 2 | 0.13 | .33 | 0.83 (0.58-1.21) |
Medina 200541 | 77 | 81 | 145 | 80 | 17 | 18 | 35 | 19 | 1 | 1 | 1 | 1 | 0.10 | .47 | 1.45 (0.52-4.10) |
Navarro 20089 | 58 | 69 | 128 | 86 | 24 | 29 | 21 | 14 | 2 | 2 | 0 | 0 | 0.07 | .35 | |
Pecheniuk 200846 ) | 82 | 72 | 87 | 76 | 27 | 24 | 24 | 21 | 5 | 4 | 3 | 3 | 0.13 | .40 | 0.74 (0.37-1.50) |
Trégouët 2009–GWAS30 | 309 | 75 | 1003 | 82 | 92 | 22 | 216 | 18 | 9 | 2 | 8 | 1 | 0.09 | .32 | 1.21 (0.83-1.75) |
Trégouët 2009–MARTHA30 | 885 | 79 | 654 | 82 | 222 | 20 | 141 | 18 | 16 | 1 | 5 | 1 | 0.09 | .38 | 1.23 (0.77-1.97) |
Yamagishi 200945 | 417 | 84 | 844 | 83 | 72 | 15 | 158 | 16 | 7 | 1 | 14 | 1 | 0.09 | .04 | 0.73 (0.53-0.99) |
Chen 201147 | 49 | 75 | 63 | 89 | 15 | 23 | 7 | 10 | 1 | 2 | 1 | 1 | 0.06 | .15 | 0.44 (0.13-1.52) |
Heit 2011 | 978 | 77 | 1029 | 79 | 264 | 21 | 257 | 20 | 28 | 2 | 16 | 1 | 0.11 | .99 | 1.00 (0.76-1.32) |
MI | |||||||||||||||
Ireland 2005–EDSC-EW18 | 33 | 65 | 231 | 85 | 17 | 33 | 37 | 14 | 1 | 2 | 4 | 1 | 0.08 | .09 | 0.61 (0.34-1.10) |
Ireland 2005–EDSC-IA18 | 63 | 55 | 222 | 64 | 48 | 42 | 108 | 31 | 3 | 3 | 19 | 5 | 0.21 | .23 | 0.83 (0.62-1.12) |
Ireland 2005–HIFMECH18 | 440 | 84 | 455 | 81 | 83 | 16 | 101 | 18 | 3 | 1 | 7 | 1 | 0.10 | .60 | 0.89 (0.59-1.36) |
Ireland 2005–NPHSII18 | 166 | 85 | 1883 | 82 | 26 | 13 | 387 | 17 | 4 | 2 | 14 | 1 | 0.09 | .57 | 1.08 (0.84-1.38) |
Medina 200848 | 606 | 88 | 554 | 79 | 80 | 12 | 142 | 20 | 3 | 0 | 1 | 0 | 0.10 | .01 | 3.02 (1.12-8.16) |
Schunkert 2011–ADVANCE31 | 221 | 79 | 262 | 84 | 55 | 20 | 49 | 16 | 2 | 1 | 1 | 0 | 0.08 | .41 | 1.51 (0.55-4.20) |
Schunkert 2011 CADomics31 | 1642 | 79 | 2324 | 79 | 409 | 20 | 589 | 20 | 25 | 1 | 37 | 1 | 0.11 | .96 | 1.00 (0.84-1.20) |
Schunkert 2011 deCODE CAD31 | 5509 | 83 | 22 711 | 82 | 1078 | 16 | 4640 | 17 | 51 | 1 | 244 | 1 | 0.09 | .68 | 0.99 (0.92-1.06) |
Schunkert 2011 GerMIFS I31 | 670 | 77 | 1225 | 77 | 184 | 21 | 344 | 22 | 11 | 1 | 23 | 1 | 0.12 | .84 | 1.02 (0.81-1.29) |
Schunkert 2011 GerMIFS II31 | 981 | 80 | 1007 | 78 | 227 | 19 | 265 | 21 | 14 | 1 | 15 | 1 | 0.11 | .60 | 1.08 (0.81-1.43) |
Schunkert 2011 GerMIFS III31 | 922 | 80 | 1359 | 78 | 222 | 19 | 360 | 21 | 13 | 1 | 29 | 2 | 0.12 | .36 | 0.91 (0.73-1.12) |
Schunkert 2011 MedStar31 | 369 | 83 | 721 | 82 | 76 | 17 | 148 | 17 | 2 | 0 | 6 | 1 | 0.09 | .59 | 1.13 (0.73-1.73) |
Schunkert 2011 MIGen31 | 1035 | 81 | 1151 | 82 | 224 | 18 | 240 | 17 | 12 | 1 | 14 | 1 | 0.10 | .71 | 0.95 (0.71-1.27) |
Schunkert 2011 OHGS131 | 1207 | 82 | 1141 | 81 | 257 | 18 | 263 | 19 | 4 | 0 | 11 | 1 | 0.10 | .33 | 1.17 (0.85-1.62) |
IBC 50K CAD Consortium (European)42 § | 0.10 | ||||||||||||||
IBC 50K CAD Consortium (South Asian)42 § | 0.19 |
Included study* . | AA genotype . | AG genotype . | GG genotype . | MAF† . | Deviation from Hardy-Weinberg equilibrium . | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cases . | Non-cases . | Cases . | Non-cases . | Cases . | Non-cases . | ||||||||||
n . | % . | n . | % . | n . | % . | n . | % . | n . | % . | n . | % . | χ2P value . | REH (95% CI)‡ . | ||
VTE | |||||||||||||||
Medina 200417 | 291 | 82 | 327 | 82 | 62 | 17 | 74 | 18 | 2 | 1 | 0 | 0 | 0.09 | .04 | |
Saposnik 200435 | 249 | 74 | 278 | 82 | 85 | 25 | 58 | 17 | 4 | 1 | 2 | 1 | 0.09 | .58 | 1.23 (0.59-2.58) |
Uitte de Willige 200410 | 345 | 73 | 361 | 77 | 116 | 25 | 100 | 21 | 10 | 2 | 10 | 2 | 0.13 | .33 | 0.83 (0.58-1.21) |
Medina 200541 | 77 | 81 | 145 | 80 | 17 | 18 | 35 | 19 | 1 | 1 | 1 | 1 | 0.10 | .47 | 1.45 (0.52-4.10) |
Navarro 20089 | 58 | 69 | 128 | 86 | 24 | 29 | 21 | 14 | 2 | 2 | 0 | 0 | 0.07 | .35 | |
Pecheniuk 200846 ) | 82 | 72 | 87 | 76 | 27 | 24 | 24 | 21 | 5 | 4 | 3 | 3 | 0.13 | .40 | 0.74 (0.37-1.50) |
Trégouët 2009–GWAS30 | 309 | 75 | 1003 | 82 | 92 | 22 | 216 | 18 | 9 | 2 | 8 | 1 | 0.09 | .32 | 1.21 (0.83-1.75) |
Trégouët 2009–MARTHA30 | 885 | 79 | 654 | 82 | 222 | 20 | 141 | 18 | 16 | 1 | 5 | 1 | 0.09 | .38 | 1.23 (0.77-1.97) |
Yamagishi 200945 | 417 | 84 | 844 | 83 | 72 | 15 | 158 | 16 | 7 | 1 | 14 | 1 | 0.09 | .04 | 0.73 (0.53-0.99) |
Chen 201147 | 49 | 75 | 63 | 89 | 15 | 23 | 7 | 10 | 1 | 2 | 1 | 1 | 0.06 | .15 | 0.44 (0.13-1.52) |
Heit 2011 | 978 | 77 | 1029 | 79 | 264 | 21 | 257 | 20 | 28 | 2 | 16 | 1 | 0.11 | .99 | 1.00 (0.76-1.32) |
MI | |||||||||||||||
Ireland 2005–EDSC-EW18 | 33 | 65 | 231 | 85 | 17 | 33 | 37 | 14 | 1 | 2 | 4 | 1 | 0.08 | .09 | 0.61 (0.34-1.10) |
Ireland 2005–EDSC-IA18 | 63 | 55 | 222 | 64 | 48 | 42 | 108 | 31 | 3 | 3 | 19 | 5 | 0.21 | .23 | 0.83 (0.62-1.12) |
Ireland 2005–HIFMECH18 | 440 | 84 | 455 | 81 | 83 | 16 | 101 | 18 | 3 | 1 | 7 | 1 | 0.10 | .60 | 0.89 (0.59-1.36) |
Ireland 2005–NPHSII18 | 166 | 85 | 1883 | 82 | 26 | 13 | 387 | 17 | 4 | 2 | 14 | 1 | 0.09 | .57 | 1.08 (0.84-1.38) |
Medina 200848 | 606 | 88 | 554 | 79 | 80 | 12 | 142 | 20 | 3 | 0 | 1 | 0 | 0.10 | .01 | 3.02 (1.12-8.16) |
Schunkert 2011–ADVANCE31 | 221 | 79 | 262 | 84 | 55 | 20 | 49 | 16 | 2 | 1 | 1 | 0 | 0.08 | .41 | 1.51 (0.55-4.20) |
Schunkert 2011 CADomics31 | 1642 | 79 | 2324 | 79 | 409 | 20 | 589 | 20 | 25 | 1 | 37 | 1 | 0.11 | .96 | 1.00 (0.84-1.20) |
Schunkert 2011 deCODE CAD31 | 5509 | 83 | 22 711 | 82 | 1078 | 16 | 4640 | 17 | 51 | 1 | 244 | 1 | 0.09 | .68 | 0.99 (0.92-1.06) |
Schunkert 2011 GerMIFS I31 | 670 | 77 | 1225 | 77 | 184 | 21 | 344 | 22 | 11 | 1 | 23 | 1 | 0.12 | .84 | 1.02 (0.81-1.29) |
Schunkert 2011 GerMIFS II31 | 981 | 80 | 1007 | 78 | 227 | 19 | 265 | 21 | 14 | 1 | 15 | 1 | 0.11 | .60 | 1.08 (0.81-1.43) |
Schunkert 2011 GerMIFS III31 | 922 | 80 | 1359 | 78 | 222 | 19 | 360 | 21 | 13 | 1 | 29 | 2 | 0.12 | .36 | 0.91 (0.73-1.12) |
Schunkert 2011 MedStar31 | 369 | 83 | 721 | 82 | 76 | 17 | 148 | 17 | 2 | 0 | 6 | 1 | 0.09 | .59 | 1.13 (0.73-1.73) |
Schunkert 2011 MIGen31 | 1035 | 81 | 1151 | 82 | 224 | 18 | 240 | 17 | 12 | 1 | 14 | 1 | 0.10 | .71 | 0.95 (0.71-1.27) |
Schunkert 2011 OHGS131 | 1207 | 82 | 1141 | 81 | 257 | 18 | 263 | 19 | 4 | 0 | 11 | 1 | 0.10 | .33 | 1.17 (0.85-1.62) |
IBC 50K CAD Consortium (European)42 § | 0.10 | ||||||||||||||
IBC 50K CAD Consortium (South Asian)42 § | 0.19 |
Studies are identified by the lead author's last name, year of publication, study name (if a publication included more than 1 study), and reference number.
The minor allele (G) frequency (MAF) was calculated in controls or in the underlying cohort.
The REH cannot be calculated in studies with 0 cases or controls with the GG genotype.
Genotype frequencies were not reported in the published article; however, the study authors state that the single-nucleotide polymorphism did not violate HWE in the controls (P > .0001).