Table 3

Top 50 genes most highly expressed by the nonclassical monocyte subset sorted according to decreasing absolute fold change values

Gene nameFold change normalized to intermediate*
ClassicNonclassic
Complement component 1 q subcomponent-α polypeptide (C1QA) −15.64 1.47 
Hairy and enhancer of split 4 (HES4) −14.80 1.58 
Cyclin-dependent kinase inhibitor 1C (CDKN1C) −14.06 1.62 
Complement component 1 q subcomponent-β polypeptide (C1QB) −11.56 1.36 
ras homolog gene family member C (RHOC) −8.63 1.25 
C-type lectin domain family 4 member F (CLEC4F) −8.32 1.43 
Adenosine deaminase (ADA) −7.05 1.63 
Transgelin (TAGLN) −6.06 1.60 
Transcription factor 7-like 2 (TCF7L2) −5.96 1.28 
CD79B antigen (CD79B) −5.83 1.77 
Cathepsin L (CTSL) −5.28 1.31 
Surfactant pulmonary-associated protein D (SFTPD) −4.74 2.07 
ABI gene family member 3 (ABI3) −4.65 1.08 
SET binding protein 1 (SETBP1) −4.61 1.47 
Fibroblast growth factor receptor-like 1 (FGFRL1) −4.54 1.19 
CD79B antigen (CD79B) −4.31 1.48 
Sprouty-related EVH1 domain containing 1 (SPRED1) −4.23 1.19 
Jun dimerization protein p21SNFT (SNFT) −4.23 1.35 
Enah/Vasp-like (EVL) −4.21 1.12 
Metastasis suppressor 1 (MTSS1) −4.00 1.72 
SH2 domain containing 1B (SH2D1B) −2.38 3.79 
Cytoplasmic FMR1 interacting protein 2 (CYFIP2) −3.94 1.42 
Nasal embryonic LHRH factor (NELF) −3.92 1.06 
Cbl-interacting protein Sts-1 (STS-1) −3.83 1.18 
Sialic acid binding Ig-like lectin 10 (SIGLEC10) −3.63 1.46 
CDC28 protein kinase regulatory subunit 1B (CKS1B) −3.63 1.23 
Protein tyrosine phosphatase type IVA member 3 (PTP4A3) −3.61 1.97 
LY6/PLAUR domain containing 2 (LYPD2) −3.59 5.87 
SID1 transmembrane family member 2 (SIDT2) −3.59 1.26 
Insulin-induced gene 1 (INSIG1) −3.59 1.61 
Lymphotoxin-β (LTB) −3.50 1.27 
3′-Phosphoadenosine 5′-phosphosulfate synthase 2 (PAPSS2) −3.41 1.38 
ATP-binding cassette subfamily C member 3 (ABCC3) −3.41 1.79 
Caspase 5 apoptosis-related cysteine peptidase (CASP5) −3.39 1.65 
Vitelline membrane outer layer 1 homolog (chicken; VMO1) −1.35 3.28 
Heat shock 27kDa protein 1 (HSPB1) −3.27 1.09 
Guanine nucleotide binding protein-γ transducing activity polypeptide 2 (GNGT2) −3.26 1.16 
Heme oxygenase (decycling) 1 (HMOX1) −3.25 1.34 
Related RAS viral (r-ras) oncogene homolog (RRAS) −3.22 1.21 
Ring finger protein 122 (RNF122) −3.21 1.59 
Cadherin-like 23 (CDH23) −3.20 3.60 
Formin-like 2 (FMNL2) −3.20 1.60 
Regulator of G-protein signalling 12 (RGS12) −3.19 1.29 
Secretoglobin family 3A member 1 (SCGB3A1) −3.17 2.07 
fer-1-like 3 myoferlin (C. elegans) (FER1L3) −3.15 1.11 
Calmodulin-like 4 (CALML4) −3.08 1.12 
Interferon-induced transmembrane protein 3 (IFITM3) −3.07 1.03 
Creatine kinase brain (CKB) −2.22 3.07 
Interferon-induced transmembrane protein 1 (IFITM1) −3.04 1.30 
Carcinoembryonic antigen-related cell adhesion molecule 3 (CEACAM3) −2.99 1.22 
Gene nameFold change normalized to intermediate*
ClassicNonclassic
Complement component 1 q subcomponent-α polypeptide (C1QA) −15.64 1.47 
Hairy and enhancer of split 4 (HES4) −14.80 1.58 
Cyclin-dependent kinase inhibitor 1C (CDKN1C) −14.06 1.62 
Complement component 1 q subcomponent-β polypeptide (C1QB) −11.56 1.36 
ras homolog gene family member C (RHOC) −8.63 1.25 
C-type lectin domain family 4 member F (CLEC4F) −8.32 1.43 
Adenosine deaminase (ADA) −7.05 1.63 
Transgelin (TAGLN) −6.06 1.60 
Transcription factor 7-like 2 (TCF7L2) −5.96 1.28 
CD79B antigen (CD79B) −5.83 1.77 
Cathepsin L (CTSL) −5.28 1.31 
Surfactant pulmonary-associated protein D (SFTPD) −4.74 2.07 
ABI gene family member 3 (ABI3) −4.65 1.08 
SET binding protein 1 (SETBP1) −4.61 1.47 
Fibroblast growth factor receptor-like 1 (FGFRL1) −4.54 1.19 
CD79B antigen (CD79B) −4.31 1.48 
Sprouty-related EVH1 domain containing 1 (SPRED1) −4.23 1.19 
Jun dimerization protein p21SNFT (SNFT) −4.23 1.35 
Enah/Vasp-like (EVL) −4.21 1.12 
Metastasis suppressor 1 (MTSS1) −4.00 1.72 
SH2 domain containing 1B (SH2D1B) −2.38 3.79 
Cytoplasmic FMR1 interacting protein 2 (CYFIP2) −3.94 1.42 
Nasal embryonic LHRH factor (NELF) −3.92 1.06 
Cbl-interacting protein Sts-1 (STS-1) −3.83 1.18 
Sialic acid binding Ig-like lectin 10 (SIGLEC10) −3.63 1.46 
CDC28 protein kinase regulatory subunit 1B (CKS1B) −3.63 1.23 
Protein tyrosine phosphatase type IVA member 3 (PTP4A3) −3.61 1.97 
LY6/PLAUR domain containing 2 (LYPD2) −3.59 5.87 
SID1 transmembrane family member 2 (SIDT2) −3.59 1.26 
Insulin-induced gene 1 (INSIG1) −3.59 1.61 
Lymphotoxin-β (LTB) −3.50 1.27 
3′-Phosphoadenosine 5′-phosphosulfate synthase 2 (PAPSS2) −3.41 1.38 
ATP-binding cassette subfamily C member 3 (ABCC3) −3.41 1.79 
Caspase 5 apoptosis-related cysteine peptidase (CASP5) −3.39 1.65 
Vitelline membrane outer layer 1 homolog (chicken; VMO1) −1.35 3.28 
Heat shock 27kDa protein 1 (HSPB1) −3.27 1.09 
Guanine nucleotide binding protein-γ transducing activity polypeptide 2 (GNGT2) −3.26 1.16 
Heme oxygenase (decycling) 1 (HMOX1) −3.25 1.34 
Related RAS viral (r-ras) oncogene homolog (RRAS) −3.22 1.21 
Ring finger protein 122 (RNF122) −3.21 1.59 
Cadherin-like 23 (CDH23) −3.20 3.60 
Formin-like 2 (FMNL2) −3.20 1.60 
Regulator of G-protein signalling 12 (RGS12) −3.19 1.29 
Secretoglobin family 3A member 1 (SCGB3A1) −3.17 2.07 
fer-1-like 3 myoferlin (C. elegans) (FER1L3) −3.15 1.11 
Calmodulin-like 4 (CALML4) −3.08 1.12 
Interferon-induced transmembrane protein 3 (IFITM3) −3.07 1.03 
Creatine kinase brain (CKB) −2.22 3.07 
Interferon-induced transmembrane protein 1 (IFITM1) −3.04 1.30 
Carcinoembryonic antigen-related cell adhesion molecule 3 (CEACAM3) −2.99 1.22 
*

Obtained by calculating the MFI values of classical or nonclassical relative to intermediate.

Close Modal

or Create an Account

Close Modal
Close Modal