Summary of GATA1 mutations and patient characteristics for ML-DS samples
Patient no. . | Blast count, % of total nucleated count . | WAVE* . | Mutation . | Size, bp . | Position of mutation† . | Predicted effect of mutation on RNA . | Age at diagnosis, mo . | WBC count, ×109/L . | Hb level, g/dL . | Plt count, ×109/L . | Kanezaki et al15 class . | Karyotype . | Outcome . |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 70 | Ex2 | Del | 56 | 4750 | Frameshift and introduction of stop codon | 24 | 12.6 | 5.7 | 22 | PTC 1-3′ | 47, XY, Del(7)(q32), +8, +21c | CCR |
2 | 15 | Ex2 | Dup | 13 | 4709 | Frameshift and introduction of stop codon | N/A | 5.3 | 7.6 | 22 | PTC 1-5′ | 47, XX, +21c | CCR |
3 | 84 | Ex2 | Ins | 11 | 4724 | Frameshift and introduction of stop codon | 23 | 27.7 | 8.5 | 19 | PTC 1-3′ | 47, XX, +21c | CCR |
4‡ | 90 | Ex2 | Dup | 20 | 4722 | Frameshift and introduction of stop codon | 36 | 8.5 | 11.3 | 20 | PTC 1-3′ | 56, XX, +2, +6, +8, +13, +13, +14, +14, −16, del(17)(q?22−24), +19, +del(19) (p13), +21, +21c[7], | CCR |
5 | 20 | Ex2 | Point | 1 | 4549 | Loss of start codon | 20 | 3.16 | 11 | 36 | 1st Met | 48, XY, +8, +21 | CCR |
6 | N/A | Ex2 | Del | 13 | 4753 | Frameshift and introduction of stop codon | 5 | 40 | 8.9 | 27 | PTC 1-3′ | 48, XY, der(1)add(1) (p32)dup(1)(q21q42), del(3)(q21q26),I(7) (q10),del(16)(q22q24), +21 | Died |
7 | 14 | Ex2 | Del | 10 | 4767 | Frameshift and introduction of stop codon | 21 | 27.8 | 5.4 | 85 | PTC 1-3′ | 47, XY, +21c | Died |
8 | N/A | Ex2 | Point | 1 | 4548 | Loss of splice acceptor site | 24 | 4.1 | 2.1 | 6 | Splice | 47XX,i(7)(q10),−16, +21c, +mar[7] | CCR |
9 | N/A | Ex2 | Dup | 20 | 4728 | Frameshift and introduction of stop codon | 1.2 | 11.9 | 7.5 | 18 | PTC 1-3′ | 47,XX, add(1)(q24), del(5)(p13), +21c | CCR |
10 | 50 | Ex2 | Point | 1 | 4768 | Loss of splice acceptor site | 31 | 2.8 | 9.7 | 21 | Splice | 48, XX, Add(8)(p23), +11, +21c[16]/ 47, XX, +21c [19] | CCR |
11 | N/A | Ex2 | Del | 29 | 4669 | Frameshift and introduction of stop codon | 2 | 14 | 13 | 112 | PTC 1-5′ | 47, XY, +21, +8 | CCR |
12 | N/A | Ex2 | Point | 1 | 4768 | Loss of splice acceptor site | 24 | 33.4 | 2.9 | 3.6 | Splice | 46,XX, der(7)add(7)(p?), −13,+21c[9]/47, XX,+21c | Died |
13 | 60 | Ex2 | Point | 1 | 4768 | Loss of splice acceptor site | 60 | 17.4 | 11 | 32 | Splice | 55∼57, XX, del(1)(q21;q25), +2, +3?adk1(5)(q33), i(7)(q10), +8, der(12)(t1;12)(q21;p13), +13, +14, +18, +19, +21, +22 | Died |
14 | 20 | Ex2 | Point | 1 | 4768 | Loss of splice acceptor site | 26 | 11.2 | 9.7 | 28 | Splice | 47. XX. +21c[36] | Unknown |
15 | 78 | Ex2 | Ins | 1 | 4736 | Frameshift and introduction of stop codon | 25 | 42.8 | 8.2 | 33 | PTC 1-3′ | 47, XY, dup(X) (p11.2,p21), +21c [2], 47, idem, der (4), t(2;4)(q31;q31), ?del(6)(q2?5; q2?7), +21c [5], 47, XY, +21c[3] | CCR |
16 | 37 | Ex2 | Ins | 1 | 4693 | Frameshift and introduction of stop codon | N/A | N/A | N/A | N/A | PTC 1-5′ | N/A | Relapsed |
17 | 16 | Ex2 | Point | 1 | 4597 | Nonsynonymous change in amino acid sequence introducing a stop codon | 31 | 1.7 | 8.7 | 14 | PTC 1-5′ | 48, XX, + 8, +21c | Unknown |
18 | N/A | Ex2 | Ins | 1 | 4632 | Frameshift and introduction of stop codon | 17 | 29 | 11.5 | 5 | PTC 1-5′ | 47 XX, +21c | Died |
19 | 36 | Ex2 | Del | 35 | 4684 | Frameshift and introduction of stop codon | 36 | 9.8 | 9 | 24 | PTC 1-5′ | 48, XX, +8, +21 | CCR |
20 | 93 | Ex2 | Ins | 1 | 4769 | Loss of splice acceptor site | N/A | 200.3 | 4.7 | 23 | Splice | 47, XX, t(3;17) (q25;q25), del(6)(q13;q22), +21c[19] | CCR |
21 | 20 | Ex2 | Del | 7 | 4705 | Frameshift and introduction of stop codon | 24 | 5.4 | 3.7 | 9 | PTC 1-5′ | 47, XY, +21, +8 | Died |
22‡ | 23 | Ex2 | Dup | 8 | 4717 | Frameshift and introduction of stop codon | 6 | 32 | 8.7 | 22 | PTC 1-5′ | 47, XY, t(5;11) (p15;q13), add(9)(q34), +21c[6]/ 47, XY, +21c[14] | CCR |
23 | 21 | Ex2 | Del | 2 | 4638 | Frameshift and introduction of stop codon | 11 | 6.4 | 15.1 | 5.1 | PTC 1-5′ | 47, XX, del (6), del (21), +21 | Died |
24 | 44 | Ex2 | Del | 23 | 4705 | Frameshift and introduction of stop codon | 13 | 8.3 | N/A | N/A | PTC 1-5′ | 48, XX, del (6) (q?13q?21) +21c, +21 [5] | CCR |
25 | 50 | Ex2 | Del | 2 | 4638 | Frameshift and introduction of stop codon | 12 | 7.3 | N/A | N/A | PTC 1-5′ | 50, XY, +10, +21c, +21, +22 [6] | CCR |
26‡ | 16 | N/D | Dup | 10 | 4710 | Frameshift and introduction of stop codon | 11 | 3.5 | 11.9 | 30 | PTC 1-5′ | 47∼49,XY, +?19,+21c, +21[cp7]/47, XY,+21c[5] | CCR |
27 | 20 | N/D | Dup | 15 | 4715 | Frameshift and introduction of stop codon | 15 | 6.4 | 7.6 | 60 | PTC 1-5′ | 47,XY,+21c 2/47, idem,t(4;15), (q?21;q?21), del(7)(q?31q?33) | Unknown |
28 | 8.5 | N/D | Del | 1 | 4698 | Frameshift and introduction of stop codon | 8 | 4 | 13.4 | 70 | PTC 1-5′ | N/A | Unknown |
29 | 31 | N/D | Del | 5 | 4704 | Frameshift and introduction of stop codon | 13 | 3.9 | 11.2 | 47 | PTC 1-5′ | 47,XX,der(5)t(1;5) (q12;p14)?del(1) (q23q25),+21c[4]/48, XX,+8,der (12)t(1;12)(q12;p12), +21c[2]/47, XX,+21c[9] | Unknown |
30 | 93 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 24 | 26.4 | 9.1 | 147 | PTC 1-5′ | 47,XY,+21c[25] | Unknown |
31 | 39 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 27 | 8.5 | 8.5 | 26 | PTC 1-5′ | N/A | Unknown |
32‡ | 4.5 | N/D | Del | 2 | 4604 | Frameshift and introduction of stop codon | 13 | 1 | 7.7 | 107 | PTC 1-5′ | N/A | Unknown |
33 | 19.5 | N/D | Ins + Dup | 2 + 14 | 4722 | Frameshift and introduction of stop codon | 21 | 26.4 | 7.2 | 151 | PTC 1-3′ | N/A | Unknown |
34 | 50.5 | N/D | Ins | 1 | 4768 | Frameshift and introduction of stop codon | 28 | 1.2 | 8 | 109 | Splice | 47∼48,XX,?add (5)(p1?5),−8, +21,+21c, +mar1, +mar2[cp8]/47, XX,+21c | Unknown |
35 | 10.5 | N/D | Point | 1 | 4768 | Loss of splice acceptor site | 35 | 3.4 | 10.4 | 17 | Splice | N/A | Unknown |
36 | 36 | N/D | Dup | 5 | 4734 | Frameshift and introduction of stop codon | 14 | 12.4 | 7.2 | 144 | PTC 1-3′ | 47,XX,+21c | Unknown |
37 | 34 | N/D | Del | 22 | 4704 | Frameshift and introduction of stop codon | 22 | 15.1 | 9.6 | 257 | PTC 1-5′ | 48,XY,+8,+21c | Unknown |
38 | 55 | N/D | Del + Ins | 31 + 6 | 4783 | Loss of splice donor site | 31 | 1.9 | 6.9 | 22 | Splice | N/A | Unknown |
39 | 35 | N/D | Dup | 3 | 4737 | Frameshift and introduction of stop codon | 31 | 4.2 | 9.2 | 20 | PTC 1-3′ | N/A | Unknown |
40 | 38 | N/D | Del + ins | 24 + 4 | 4683 | Frameshift and introduction of stop codon | 31 | 6.1 | 9.8 | 16 | PTC 1-5′ | N/A | Unknown |
41 | 43 | N/D | Dup | 21 | 4736 | Frameshift and introduction of stop codon | 13 | 4.9 | 6.7 | 38 | PTC 1-3′ | N/A | Unknown |
42 | 15 | N/D | Dup | 4 | 4668 | Frameshift and introduction of stop codon | 20 | 8.1 | 12.7 | 219 | PTC 1-5′ | 47,XX,+21c | Unknown |
43 | 16 | N/D | Dup | 7 | 4717 | Frameshift and introduction of stop codon | 36 | 160 | 5 | 1.5 | PTC 1-5′ | 47,XY,+21c,[3]/47, idem,t(1;8)(q32;q22) [2]/48,idem,t(1;8) (q32;q22),+der(8)t (1;8)(q32;q22) [10}] | Unknown |
44 | 24 | N/D | Ins | 5 | 4708 | Frameshift and introduction of stop codon | 10 | 6.88 | 9.7 | 35 | PTC 1-5′ | N/A | Unknown |
45 | 11 | N/D | Point | 1 | 4956 | Synonymous mutation | 16 | 2.5 | 8.1 | 101 | Unknown | N/A | Unknown |
46 | 28 | N/D | Ins | 1 | 4736 | Frameshift and introduction of stop codon | 31 | 12.9 | 3.1 | 76 | PTC 1-3′ | N/A | Unknown |
47 | 14 | N/D | Point | 1 | 4535 | Unknown | 31 | 22 | 8.5 | 37 | Unknown | 48, XY, +14, +21 | Unknown |
48 | 13 | N/D | Del | 9 | 4546 | Loss of Start codon | 19 | 6.2 | 10.6 | 131 | 1st Met | 48,XY,i(7)(q10), t(11;11)(p15;q13), +21,+21[13]/47,XY,+21[2] | Unknown |
49 | 15 | N/D | Point | 1 | 4768 | Loss of splice acceptor site | 12 | 5 | 12.1 | 45 | Splice | N/A | Unknown |
50 | 15 | N/D | Del | 7 | 4702 | Frameshift and introduction of stop codon | 20 | 2.74 | 10.7 | 110 | PTC 1-5′ | 50,XX,+8, +14,+21,+21c, inc[5]/47, XX,+21c[7] | Unknown |
51‡ | 16 | N/D | Point | 1 | 4552 | Nonsynonymous change in amino acid sequence | 12 | 3.4 | 11.1 | 27 | Unknown | 47,XY,?der(11) (q24∼25), +21c[2]/47, XY,+21c[8] | Unknown |
52 | 9 | N/D | Del + ins | 2 + 1 | 4619 | Frameshift and introduction of stop codon | 15 | 3.5 | 9.2 | 47 | PTC 1-5′ | 46,XY,i(7) (q10),der(21;21) (q10;q10)c, +21[6]/46,XY,der(21;21) (q10;q10)c, +21[5] | Unknown |
53 | 12 | N/D | Del + ins | 3 + 1 | 4654 | Frameshift and introduction of stop codon | 7 | 2.9 | 3.3 | 17 | PTC 1-5′ | 48,XX,der(1) (p?q?),+21c, +mar[14]/47,XX,+21c[4] | Unknown |
54 | 10.5 | N/D | Dup | 20 | 4727 | Frameshift and introduction of stop codon | 16 | 4.8 | 12 | 59 | PTC 1-3′ | N/A | Unknown |
55 | 17 | N/D | Not Found | Unknown | Unknown | Unknown | 21 | 5.9 | 11.4 | 42 | Unknown | 47,XX,+21c | Unknown |
56 | N/A | N/D | Dup | 16 | 4734 | Frameshift and introduction of stop codon | N/A | N/A | N/A | N/A | PTC 1-3′ | N/A | Unknown |
57 | 23 | N/D | Point | 1 | 4767 | Loss of splice acceptor site | 26 | 5.1 | 13.3 | 11 | Splice | 48∼50,XY, +8,+?14, +21,+21c[cp6]/47,XY,+21c[4] | Unknown |
58 | 21 | N/D | Point + Del | 1 + 1 | 4637 + 4639 | Frameshift and introduction of stop codon | 37 | 6.3 | 11.4 | 13.7 | Unknown | 47,XX,?del(2)(q35), del(7)(p12),+21c[7]/47,XX,+21c[5] | Unknown |
59 | 13 | N/D | Del | 1 | 4698 | Frameshift and introduction of stop codon | 11 | 6.3 | 10.3 | 84 | PTC 1-5′ | 47,XY,+21c[9]; 48,XY,del(5) (p11p14),r(7) (p22q11), +8,+21c[7] | Unknown |
60 | 35 | N/D | Del | 1 | 4548 | Unknown | 11 | 16 | 8 | 38 | Unknown | N/A | Unknown |
61 | 7 | N/D | Del | 1 | 4642 | Frameshift and introduction of stop codon | 15 | 1.8 | 9.3 | 43 | PTC 1-5′ | 47,XY,+21[1] | Unknown |
62 | 1 | N/D | Not Found | Unknown | Unknown | Unknown | 19 | 2.6 | 5.8 | 109 | Unknown | N/A | Unknown |
63 | 20.5 | N/D | Del + ins | 4 + 2 | 4656 | Frameshift and introduction of stop codon | 11 | 3.7 | 10.7 | 130 | PTC 1-5′ | 48,XX,+8,+21c[3]/47,XX,+21c[8] | Unknown |
64 | 2.5 | N/D | Del | 2 | 4656 | Frameshift and introduction of stop codon | 32 | 4.8 | 7.4 | 17 | PTC 1-5′ | 47,XX,+21c[6] | Unknown |
65 | 46 | N/D | Dup | 16 | 4719 | Frameshift and introduction of stop codon | 20 | 5.6 | 12 | 19 | PTC 1-3′ | N/A | Unknown |
66 | 19.5 | N/D | Point | 1 | 4767 | Loss of splice acceptor site | 32 | 5.46 | 13.6 | 52 | Splice | N/A | Unknown |
67 | 2 | N/D | Del | 1 | 4737 | Frameshift and introduction of stop codon | 26 | 3.3 | 7.1 | 69 | PTC 1-3′ | N/A | Unknown |
68 | 16 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 35 | 2.8 | 9.5 | 20 | PTC 1-5′ | 48,XX,+8,+21c | Unknown |
69 | 23 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 13 | 3.2 | 9 | 25 | PTC 1-5′ | 47,XY,+21c[10] | Unknown |
70 | 76 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 17 | 23 | 6.5 | 28 | PTC 1-5′ | 46,XY,t(4;13) (q33∼34;q14), der(5)t(5;7) (p14∼15;q12), −7,+21c[cp11] | Unknown |
71 | 3.5 | N/D | Del | 2 | 4656 | Frameshift and introduction of stop codon | 13 | 3.3 | 11.4 | 46 | PTC 1-5′ | 47,XX,+21c[17] | Unknown |
72 | N/A | N/D | Point | 1 | 4637 | Unknown | N/A | N/A | N/A | N/A | Unknown | N/A | Unknown |
73 | 20 | N/D | Point | 1 | 4713 | Synonymous mutation | 19 | 4.1 | 9.5 | 13 | Unknown | 48∼49,XY,+21, +21c,inc[cp2]/47,XY,+21c[12] | Unknown |
74 | 42 | N/D | Not Found | Unknown | Unknown | Unknown | 24 | 5.4 | 10.3 | 21 | Unknown | 47,XY,+21c, ?der(22)(p12) [5]/47,XY, +21c[15] | Unknown |
75‡ | 25 | N/D | Dup | 13 | 4744 | Frameshift and introduction of stop codon | 26 | 2.7 | 11.8 | 20 | PTC 1-3′ | 47,XY,+21.ish 21qter(D21 S1446 × 3) | Unknown |
76 | 96 | N/D | Point | 1 | 4737 | Nonsynonymous change in amino acid sequence | 22 | 124 | 5.9 | 21 | Unknown | 47,X,−X, del(6)(q13q16), +21c,+21 | Unknown |
77 | 10.5 | N/D | Not Found | Unknown | Unknown | Unknown | 17 | 5.2 | 10.6 | 82 | Unknown | 47,XX,add(16) (p13),+21c[5]/47,XX,+21c[5] | Unknown |
78 | 26 | N/D | Point | 1 | 4956 | Synonymous mutation | 20 | 2 | 6.4 | 130 | Unknown | 48,XY,der(8)t (1;8)(q21; p22∼23), +11,+21c[7]/47,XY,+21c[8] | Unknown |
79 | 11 | N/D | Point | 1 | 4768 | Loss of splice acceptor site | 43 | 6.35 | 12 | 70 | Splice | N/A | Unknown |
80 | 13 | N/D | Point | 1 | 4633 | Nonsynonymous change in amino acid sequence | 16 | 3.3 | 10.5 | 84 | Unknown | N/A | Unknown |
81‡ | 26 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 11 | 3.4 | 10.2 | 28 | PTC 1-5′ | 47,XY,+21c[15] | Unknown |
82 | 6 | N/D | Ins | 2 | 4725 | Frameshift and introduction of stop codon | 14 | 4 | 10.2 | 70 | PTC 1-3′ | N/A | Unknown |
83 | 4 | N/D | Dup | 6 | 4714 | Frameshift and introduction of stop codon | 8 | 8.75 | 11.4 | 69 | PTC 1-5′ | N/A | Unknown |
84 | N/A | N/D | Dup | 48 | 4771 | Frameshift and introduction of stop codon | N/A | N/A | N/A | N/A | PTC 1-3′ | N/A | Unknown |
85 | 17.5 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 11 | 4.7 | 9.3 | 83 | PTC 1-5′ | N/A | Unknown |
86 | 45 | N/D | Dup | 10 | 4723 | Frameshift and introduction of stop codon | 14 | 11.5 | 8.6 | 44 | PTC 1-3′ | N/A | Unknown |
87 | 70.5 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 16 | 32.5 | 7.9 | 103 | PTC 1-5′ | 46,XY[22]. nuc ish 8q22(ETOx2), 21q22(AML1 × 2), 13q14(RB1 × 2), 13q34 × 2), 11q23(MLLx2)[100] | Unknown |
88 | 31 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 29 | 11.4 | 13.2 | 57.4 | PTC 1-5′ | 46,XX,del (9)(q?13q33), der(19)t(1;19) (q31;p13), der(21;21) (q10;q10)?c | Unknown |
89 | 7.5 | N/D | Del | 22 | 4706 | Frameshift and introduction of stop codon | 17 | 7.8 | 11.1 | 27 | PTC 1-5′ | 48,XY,add(7) (p2?2),+8, del(13)(q1?4), +21c[7]/46, XY,−21,+21c or 46,XY[3]/47,XY,+21c[2] | Unknown |
90 | 33 | N/D | Del + ins | 2 + 6 | 4707 | Frameshift and introduction of stop codon | 8 | 4.6 | 7.5 | 3 | PTC 1-5′ | N/A | Unknown |
91‡ | 24 | N/D | Ins | 1 | 4733 | Frameshift and introduction of stop codon | 11 | 3 | 7.1 | 57 | PTC 1-3′ | 48,X,add(Y) (q12),+11, +21c[8]/47,XY, +21c[7] | Unknown |
92 | 28 | N/D | Dup | 10 | 4719 | Frameshift and introduction of stop codon | 22 | 5.2 | 13.7 | 143 | PTC 1-3′ | N/A | Unknown |
93 | 16 | Ex2 | Not Found | N/A | N/A | N/A | 1 | 1.5 | 10.4 | 13 | Unknown | 47, XY, +21c | Died |
94 | 30 | Ex2 | Not Found | N/A | N/A | N/A | 15 | 14.47 | 4.1 | 38 | Unknown | 47, XX, t(3;3)(q21;q26), t(3;3)(p2?3;q13.3), +21c[13]/47, idem, der(3)t(3;3)add(3)(q29)[7] | CCR |
95 | 20 | Ex2 | Not Found | N/A | N/A | N/A | 17 | 11 | 9.9 | 52 | Unknown | 47, XY, der(11)t (q23p15)t (1:11)(q23;q85), +21c | CCR |
96 | 10 | Ex2 | Not Found | N/A | N/A | N/A | 11 | N/A | 8.6 | 86 | Unknown | 47, XY, del (7), +21 | Unknown |
97 | 21 | Ex2 | Not Found | N/A | N/A | N/A | 33 | 4.9 | 6 | 15 | Unknown | 48, XY, +21, +21c | CCR |
98 | 20 | Ex2 | Not Found | N/A | N/A | N/A | 15 | 15.2 | 9.9 | 18 | Unknown | 47 XX, ?dup(3) (p23p25), del(8) (p11.2p21), der(15)t(1:15) (q21;p11), del(16)(q22q24, del(20) | CCR |
99 | 6 | Ex2 | Not Found | N/A | N/A | N/A | 23 | 5.1 | 7.2 | 49 | Unknown | N/A | Unknown |
100 | 20 | Ex2 | Not Found | N/A | N/A | N/A | 38 | N/A | N/A | N/A | Unknown | 46, XX, +21, −7 | Unknown |
101 | 38 | Ex2 | Not Found | N/A | N/A | N/A | 21 | 11.9 | 7.3 | 34 | Unknown | 47, XX, +21c | CCR |
102 | 10 | Ex2 | Not Found | N/A | N/A | N/A | 10 | 3.9 | 10.9 | 65 | Unknown | N/A | Unknown |
103 | 20 | Ex2 | Not Found | N/A | N/A | N/A | 12 | 3.8 | 8.6 | 16 | Unknown | 47, XX, t(1;22)(q23;p13), +21c[9]/ 47, XX, +21c[4] | CCR |
Patient no. . | Blast count, % of total nucleated count . | WAVE* . | Mutation . | Size, bp . | Position of mutation† . | Predicted effect of mutation on RNA . | Age at diagnosis, mo . | WBC count, ×109/L . | Hb level, g/dL . | Plt count, ×109/L . | Kanezaki et al15 class . | Karyotype . | Outcome . |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 70 | Ex2 | Del | 56 | 4750 | Frameshift and introduction of stop codon | 24 | 12.6 | 5.7 | 22 | PTC 1-3′ | 47, XY, Del(7)(q32), +8, +21c | CCR |
2 | 15 | Ex2 | Dup | 13 | 4709 | Frameshift and introduction of stop codon | N/A | 5.3 | 7.6 | 22 | PTC 1-5′ | 47, XX, +21c | CCR |
3 | 84 | Ex2 | Ins | 11 | 4724 | Frameshift and introduction of stop codon | 23 | 27.7 | 8.5 | 19 | PTC 1-3′ | 47, XX, +21c | CCR |
4‡ | 90 | Ex2 | Dup | 20 | 4722 | Frameshift and introduction of stop codon | 36 | 8.5 | 11.3 | 20 | PTC 1-3′ | 56, XX, +2, +6, +8, +13, +13, +14, +14, −16, del(17)(q?22−24), +19, +del(19) (p13), +21, +21c[7], | CCR |
5 | 20 | Ex2 | Point | 1 | 4549 | Loss of start codon | 20 | 3.16 | 11 | 36 | 1st Met | 48, XY, +8, +21 | CCR |
6 | N/A | Ex2 | Del | 13 | 4753 | Frameshift and introduction of stop codon | 5 | 40 | 8.9 | 27 | PTC 1-3′ | 48, XY, der(1)add(1) (p32)dup(1)(q21q42), del(3)(q21q26),I(7) (q10),del(16)(q22q24), +21 | Died |
7 | 14 | Ex2 | Del | 10 | 4767 | Frameshift and introduction of stop codon | 21 | 27.8 | 5.4 | 85 | PTC 1-3′ | 47, XY, +21c | Died |
8 | N/A | Ex2 | Point | 1 | 4548 | Loss of splice acceptor site | 24 | 4.1 | 2.1 | 6 | Splice | 47XX,i(7)(q10),−16, +21c, +mar[7] | CCR |
9 | N/A | Ex2 | Dup | 20 | 4728 | Frameshift and introduction of stop codon | 1.2 | 11.9 | 7.5 | 18 | PTC 1-3′ | 47,XX, add(1)(q24), del(5)(p13), +21c | CCR |
10 | 50 | Ex2 | Point | 1 | 4768 | Loss of splice acceptor site | 31 | 2.8 | 9.7 | 21 | Splice | 48, XX, Add(8)(p23), +11, +21c[16]/ 47, XX, +21c [19] | CCR |
11 | N/A | Ex2 | Del | 29 | 4669 | Frameshift and introduction of stop codon | 2 | 14 | 13 | 112 | PTC 1-5′ | 47, XY, +21, +8 | CCR |
12 | N/A | Ex2 | Point | 1 | 4768 | Loss of splice acceptor site | 24 | 33.4 | 2.9 | 3.6 | Splice | 46,XX, der(7)add(7)(p?), −13,+21c[9]/47, XX,+21c | Died |
13 | 60 | Ex2 | Point | 1 | 4768 | Loss of splice acceptor site | 60 | 17.4 | 11 | 32 | Splice | 55∼57, XX, del(1)(q21;q25), +2, +3?adk1(5)(q33), i(7)(q10), +8, der(12)(t1;12)(q21;p13), +13, +14, +18, +19, +21, +22 | Died |
14 | 20 | Ex2 | Point | 1 | 4768 | Loss of splice acceptor site | 26 | 11.2 | 9.7 | 28 | Splice | 47. XX. +21c[36] | Unknown |
15 | 78 | Ex2 | Ins | 1 | 4736 | Frameshift and introduction of stop codon | 25 | 42.8 | 8.2 | 33 | PTC 1-3′ | 47, XY, dup(X) (p11.2,p21), +21c [2], 47, idem, der (4), t(2;4)(q31;q31), ?del(6)(q2?5; q2?7), +21c [5], 47, XY, +21c[3] | CCR |
16 | 37 | Ex2 | Ins | 1 | 4693 | Frameshift and introduction of stop codon | N/A | N/A | N/A | N/A | PTC 1-5′ | N/A | Relapsed |
17 | 16 | Ex2 | Point | 1 | 4597 | Nonsynonymous change in amino acid sequence introducing a stop codon | 31 | 1.7 | 8.7 | 14 | PTC 1-5′ | 48, XX, + 8, +21c | Unknown |
18 | N/A | Ex2 | Ins | 1 | 4632 | Frameshift and introduction of stop codon | 17 | 29 | 11.5 | 5 | PTC 1-5′ | 47 XX, +21c | Died |
19 | 36 | Ex2 | Del | 35 | 4684 | Frameshift and introduction of stop codon | 36 | 9.8 | 9 | 24 | PTC 1-5′ | 48, XX, +8, +21 | CCR |
20 | 93 | Ex2 | Ins | 1 | 4769 | Loss of splice acceptor site | N/A | 200.3 | 4.7 | 23 | Splice | 47, XX, t(3;17) (q25;q25), del(6)(q13;q22), +21c[19] | CCR |
21 | 20 | Ex2 | Del | 7 | 4705 | Frameshift and introduction of stop codon | 24 | 5.4 | 3.7 | 9 | PTC 1-5′ | 47, XY, +21, +8 | Died |
22‡ | 23 | Ex2 | Dup | 8 | 4717 | Frameshift and introduction of stop codon | 6 | 32 | 8.7 | 22 | PTC 1-5′ | 47, XY, t(5;11) (p15;q13), add(9)(q34), +21c[6]/ 47, XY, +21c[14] | CCR |
23 | 21 | Ex2 | Del | 2 | 4638 | Frameshift and introduction of stop codon | 11 | 6.4 | 15.1 | 5.1 | PTC 1-5′ | 47, XX, del (6), del (21), +21 | Died |
24 | 44 | Ex2 | Del | 23 | 4705 | Frameshift and introduction of stop codon | 13 | 8.3 | N/A | N/A | PTC 1-5′ | 48, XX, del (6) (q?13q?21) +21c, +21 [5] | CCR |
25 | 50 | Ex2 | Del | 2 | 4638 | Frameshift and introduction of stop codon | 12 | 7.3 | N/A | N/A | PTC 1-5′ | 50, XY, +10, +21c, +21, +22 [6] | CCR |
26‡ | 16 | N/D | Dup | 10 | 4710 | Frameshift and introduction of stop codon | 11 | 3.5 | 11.9 | 30 | PTC 1-5′ | 47∼49,XY, +?19,+21c, +21[cp7]/47, XY,+21c[5] | CCR |
27 | 20 | N/D | Dup | 15 | 4715 | Frameshift and introduction of stop codon | 15 | 6.4 | 7.6 | 60 | PTC 1-5′ | 47,XY,+21c 2/47, idem,t(4;15), (q?21;q?21), del(7)(q?31q?33) | Unknown |
28 | 8.5 | N/D | Del | 1 | 4698 | Frameshift and introduction of stop codon | 8 | 4 | 13.4 | 70 | PTC 1-5′ | N/A | Unknown |
29 | 31 | N/D | Del | 5 | 4704 | Frameshift and introduction of stop codon | 13 | 3.9 | 11.2 | 47 | PTC 1-5′ | 47,XX,der(5)t(1;5) (q12;p14)?del(1) (q23q25),+21c[4]/48, XX,+8,der (12)t(1;12)(q12;p12), +21c[2]/47, XX,+21c[9] | Unknown |
30 | 93 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 24 | 26.4 | 9.1 | 147 | PTC 1-5′ | 47,XY,+21c[25] | Unknown |
31 | 39 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 27 | 8.5 | 8.5 | 26 | PTC 1-5′ | N/A | Unknown |
32‡ | 4.5 | N/D | Del | 2 | 4604 | Frameshift and introduction of stop codon | 13 | 1 | 7.7 | 107 | PTC 1-5′ | N/A | Unknown |
33 | 19.5 | N/D | Ins + Dup | 2 + 14 | 4722 | Frameshift and introduction of stop codon | 21 | 26.4 | 7.2 | 151 | PTC 1-3′ | N/A | Unknown |
34 | 50.5 | N/D | Ins | 1 | 4768 | Frameshift and introduction of stop codon | 28 | 1.2 | 8 | 109 | Splice | 47∼48,XX,?add (5)(p1?5),−8, +21,+21c, +mar1, +mar2[cp8]/47, XX,+21c | Unknown |
35 | 10.5 | N/D | Point | 1 | 4768 | Loss of splice acceptor site | 35 | 3.4 | 10.4 | 17 | Splice | N/A | Unknown |
36 | 36 | N/D | Dup | 5 | 4734 | Frameshift and introduction of stop codon | 14 | 12.4 | 7.2 | 144 | PTC 1-3′ | 47,XX,+21c | Unknown |
37 | 34 | N/D | Del | 22 | 4704 | Frameshift and introduction of stop codon | 22 | 15.1 | 9.6 | 257 | PTC 1-5′ | 48,XY,+8,+21c | Unknown |
38 | 55 | N/D | Del + Ins | 31 + 6 | 4783 | Loss of splice donor site | 31 | 1.9 | 6.9 | 22 | Splice | N/A | Unknown |
39 | 35 | N/D | Dup | 3 | 4737 | Frameshift and introduction of stop codon | 31 | 4.2 | 9.2 | 20 | PTC 1-3′ | N/A | Unknown |
40 | 38 | N/D | Del + ins | 24 + 4 | 4683 | Frameshift and introduction of stop codon | 31 | 6.1 | 9.8 | 16 | PTC 1-5′ | N/A | Unknown |
41 | 43 | N/D | Dup | 21 | 4736 | Frameshift and introduction of stop codon | 13 | 4.9 | 6.7 | 38 | PTC 1-3′ | N/A | Unknown |
42 | 15 | N/D | Dup | 4 | 4668 | Frameshift and introduction of stop codon | 20 | 8.1 | 12.7 | 219 | PTC 1-5′ | 47,XX,+21c | Unknown |
43 | 16 | N/D | Dup | 7 | 4717 | Frameshift and introduction of stop codon | 36 | 160 | 5 | 1.5 | PTC 1-5′ | 47,XY,+21c,[3]/47, idem,t(1;8)(q32;q22) [2]/48,idem,t(1;8) (q32;q22),+der(8)t (1;8)(q32;q22) [10}] | Unknown |
44 | 24 | N/D | Ins | 5 | 4708 | Frameshift and introduction of stop codon | 10 | 6.88 | 9.7 | 35 | PTC 1-5′ | N/A | Unknown |
45 | 11 | N/D | Point | 1 | 4956 | Synonymous mutation | 16 | 2.5 | 8.1 | 101 | Unknown | N/A | Unknown |
46 | 28 | N/D | Ins | 1 | 4736 | Frameshift and introduction of stop codon | 31 | 12.9 | 3.1 | 76 | PTC 1-3′ | N/A | Unknown |
47 | 14 | N/D | Point | 1 | 4535 | Unknown | 31 | 22 | 8.5 | 37 | Unknown | 48, XY, +14, +21 | Unknown |
48 | 13 | N/D | Del | 9 | 4546 | Loss of Start codon | 19 | 6.2 | 10.6 | 131 | 1st Met | 48,XY,i(7)(q10), t(11;11)(p15;q13), +21,+21[13]/47,XY,+21[2] | Unknown |
49 | 15 | N/D | Point | 1 | 4768 | Loss of splice acceptor site | 12 | 5 | 12.1 | 45 | Splice | N/A | Unknown |
50 | 15 | N/D | Del | 7 | 4702 | Frameshift and introduction of stop codon | 20 | 2.74 | 10.7 | 110 | PTC 1-5′ | 50,XX,+8, +14,+21,+21c, inc[5]/47, XX,+21c[7] | Unknown |
51‡ | 16 | N/D | Point | 1 | 4552 | Nonsynonymous change in amino acid sequence | 12 | 3.4 | 11.1 | 27 | Unknown | 47,XY,?der(11) (q24∼25), +21c[2]/47, XY,+21c[8] | Unknown |
52 | 9 | N/D | Del + ins | 2 + 1 | 4619 | Frameshift and introduction of stop codon | 15 | 3.5 | 9.2 | 47 | PTC 1-5′ | 46,XY,i(7) (q10),der(21;21) (q10;q10)c, +21[6]/46,XY,der(21;21) (q10;q10)c, +21[5] | Unknown |
53 | 12 | N/D | Del + ins | 3 + 1 | 4654 | Frameshift and introduction of stop codon | 7 | 2.9 | 3.3 | 17 | PTC 1-5′ | 48,XX,der(1) (p?q?),+21c, +mar[14]/47,XX,+21c[4] | Unknown |
54 | 10.5 | N/D | Dup | 20 | 4727 | Frameshift and introduction of stop codon | 16 | 4.8 | 12 | 59 | PTC 1-3′ | N/A | Unknown |
55 | 17 | N/D | Not Found | Unknown | Unknown | Unknown | 21 | 5.9 | 11.4 | 42 | Unknown | 47,XX,+21c | Unknown |
56 | N/A | N/D | Dup | 16 | 4734 | Frameshift and introduction of stop codon | N/A | N/A | N/A | N/A | PTC 1-3′ | N/A | Unknown |
57 | 23 | N/D | Point | 1 | 4767 | Loss of splice acceptor site | 26 | 5.1 | 13.3 | 11 | Splice | 48∼50,XY, +8,+?14, +21,+21c[cp6]/47,XY,+21c[4] | Unknown |
58 | 21 | N/D | Point + Del | 1 + 1 | 4637 + 4639 | Frameshift and introduction of stop codon | 37 | 6.3 | 11.4 | 13.7 | Unknown | 47,XX,?del(2)(q35), del(7)(p12),+21c[7]/47,XX,+21c[5] | Unknown |
59 | 13 | N/D | Del | 1 | 4698 | Frameshift and introduction of stop codon | 11 | 6.3 | 10.3 | 84 | PTC 1-5′ | 47,XY,+21c[9]; 48,XY,del(5) (p11p14),r(7) (p22q11), +8,+21c[7] | Unknown |
60 | 35 | N/D | Del | 1 | 4548 | Unknown | 11 | 16 | 8 | 38 | Unknown | N/A | Unknown |
61 | 7 | N/D | Del | 1 | 4642 | Frameshift and introduction of stop codon | 15 | 1.8 | 9.3 | 43 | PTC 1-5′ | 47,XY,+21[1] | Unknown |
62 | 1 | N/D | Not Found | Unknown | Unknown | Unknown | 19 | 2.6 | 5.8 | 109 | Unknown | N/A | Unknown |
63 | 20.5 | N/D | Del + ins | 4 + 2 | 4656 | Frameshift and introduction of stop codon | 11 | 3.7 | 10.7 | 130 | PTC 1-5′ | 48,XX,+8,+21c[3]/47,XX,+21c[8] | Unknown |
64 | 2.5 | N/D | Del | 2 | 4656 | Frameshift and introduction of stop codon | 32 | 4.8 | 7.4 | 17 | PTC 1-5′ | 47,XX,+21c[6] | Unknown |
65 | 46 | N/D | Dup | 16 | 4719 | Frameshift and introduction of stop codon | 20 | 5.6 | 12 | 19 | PTC 1-3′ | N/A | Unknown |
66 | 19.5 | N/D | Point | 1 | 4767 | Loss of splice acceptor site | 32 | 5.46 | 13.6 | 52 | Splice | N/A | Unknown |
67 | 2 | N/D | Del | 1 | 4737 | Frameshift and introduction of stop codon | 26 | 3.3 | 7.1 | 69 | PTC 1-3′ | N/A | Unknown |
68 | 16 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 35 | 2.8 | 9.5 | 20 | PTC 1-5′ | 48,XX,+8,+21c | Unknown |
69 | 23 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 13 | 3.2 | 9 | 25 | PTC 1-5′ | 47,XY,+21c[10] | Unknown |
70 | 76 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 17 | 23 | 6.5 | 28 | PTC 1-5′ | 46,XY,t(4;13) (q33∼34;q14), der(5)t(5;7) (p14∼15;q12), −7,+21c[cp11] | Unknown |
71 | 3.5 | N/D | Del | 2 | 4656 | Frameshift and introduction of stop codon | 13 | 3.3 | 11.4 | 46 | PTC 1-5′ | 47,XX,+21c[17] | Unknown |
72 | N/A | N/D | Point | 1 | 4637 | Unknown | N/A | N/A | N/A | N/A | Unknown | N/A | Unknown |
73 | 20 | N/D | Point | 1 | 4713 | Synonymous mutation | 19 | 4.1 | 9.5 | 13 | Unknown | 48∼49,XY,+21, +21c,inc[cp2]/47,XY,+21c[12] | Unknown |
74 | 42 | N/D | Not Found | Unknown | Unknown | Unknown | 24 | 5.4 | 10.3 | 21 | Unknown | 47,XY,+21c, ?der(22)(p12) [5]/47,XY, +21c[15] | Unknown |
75‡ | 25 | N/D | Dup | 13 | 4744 | Frameshift and introduction of stop codon | 26 | 2.7 | 11.8 | 20 | PTC 1-3′ | 47,XY,+21.ish 21qter(D21 S1446 × 3) | Unknown |
76 | 96 | N/D | Point | 1 | 4737 | Nonsynonymous change in amino acid sequence | 22 | 124 | 5.9 | 21 | Unknown | 47,X,−X, del(6)(q13q16), +21c,+21 | Unknown |
77 | 10.5 | N/D | Not Found | Unknown | Unknown | Unknown | 17 | 5.2 | 10.6 | 82 | Unknown | 47,XX,add(16) (p13),+21c[5]/47,XX,+21c[5] | Unknown |
78 | 26 | N/D | Point | 1 | 4956 | Synonymous mutation | 20 | 2 | 6.4 | 130 | Unknown | 48,XY,der(8)t (1;8)(q21; p22∼23), +11,+21c[7]/47,XY,+21c[8] | Unknown |
79 | 11 | N/D | Point | 1 | 4768 | Loss of splice acceptor site | 43 | 6.35 | 12 | 70 | Splice | N/A | Unknown |
80 | 13 | N/D | Point | 1 | 4633 | Nonsynonymous change in amino acid sequence | 16 | 3.3 | 10.5 | 84 | Unknown | N/A | Unknown |
81‡ | 26 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 11 | 3.4 | 10.2 | 28 | PTC 1-5′ | 47,XY,+21c[15] | Unknown |
82 | 6 | N/D | Ins | 2 | 4725 | Frameshift and introduction of stop codon | 14 | 4 | 10.2 | 70 | PTC 1-3′ | N/A | Unknown |
83 | 4 | N/D | Dup | 6 | 4714 | Frameshift and introduction of stop codon | 8 | 8.75 | 11.4 | 69 | PTC 1-5′ | N/A | Unknown |
84 | N/A | N/D | Dup | 48 | 4771 | Frameshift and introduction of stop codon | N/A | N/A | N/A | N/A | PTC 1-3′ | N/A | Unknown |
85 | 17.5 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 11 | 4.7 | 9.3 | 83 | PTC 1-5′ | N/A | Unknown |
86 | 45 | N/D | Dup | 10 | 4723 | Frameshift and introduction of stop codon | 14 | 11.5 | 8.6 | 44 | PTC 1-3′ | N/A | Unknown |
87 | 70.5 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 16 | 32.5 | 7.9 | 103 | PTC 1-5′ | 46,XY[22]. nuc ish 8q22(ETOx2), 21q22(AML1 × 2), 13q14(RB1 × 2), 13q34 × 2), 11q23(MLLx2)[100] | Unknown |
88 | 31 | N/D | Del | 2 | 4638 | Frameshift and introduction of stop codon | 29 | 11.4 | 13.2 | 57.4 | PTC 1-5′ | 46,XX,del (9)(q?13q33), der(19)t(1;19) (q31;p13), der(21;21) (q10;q10)?c | Unknown |
89 | 7.5 | N/D | Del | 22 | 4706 | Frameshift and introduction of stop codon | 17 | 7.8 | 11.1 | 27 | PTC 1-5′ | 48,XY,add(7) (p2?2),+8, del(13)(q1?4), +21c[7]/46, XY,−21,+21c or 46,XY[3]/47,XY,+21c[2] | Unknown |
90 | 33 | N/D | Del + ins | 2 + 6 | 4707 | Frameshift and introduction of stop codon | 8 | 4.6 | 7.5 | 3 | PTC 1-5′ | N/A | Unknown |
91‡ | 24 | N/D | Ins | 1 | 4733 | Frameshift and introduction of stop codon | 11 | 3 | 7.1 | 57 | PTC 1-3′ | 48,X,add(Y) (q12),+11, +21c[8]/47,XY, +21c[7] | Unknown |
92 | 28 | N/D | Dup | 10 | 4719 | Frameshift and introduction of stop codon | 22 | 5.2 | 13.7 | 143 | PTC 1-3′ | N/A | Unknown |
93 | 16 | Ex2 | Not Found | N/A | N/A | N/A | 1 | 1.5 | 10.4 | 13 | Unknown | 47, XY, +21c | Died |
94 | 30 | Ex2 | Not Found | N/A | N/A | N/A | 15 | 14.47 | 4.1 | 38 | Unknown | 47, XX, t(3;3)(q21;q26), t(3;3)(p2?3;q13.3), +21c[13]/47, idem, der(3)t(3;3)add(3)(q29)[7] | CCR |
95 | 20 | Ex2 | Not Found | N/A | N/A | N/A | 17 | 11 | 9.9 | 52 | Unknown | 47, XY, der(11)t (q23p15)t (1:11)(q23;q85), +21c | CCR |
96 | 10 | Ex2 | Not Found | N/A | N/A | N/A | 11 | N/A | 8.6 | 86 | Unknown | 47, XY, del (7), +21 | Unknown |
97 | 21 | Ex2 | Not Found | N/A | N/A | N/A | 33 | 4.9 | 6 | 15 | Unknown | 48, XY, +21, +21c | CCR |
98 | 20 | Ex2 | Not Found | N/A | N/A | N/A | 15 | 15.2 | 9.9 | 18 | Unknown | 47 XX, ?dup(3) (p23p25), del(8) (p11.2p21), der(15)t(1:15) (q21;p11), del(16)(q22q24, del(20) | CCR |
99 | 6 | Ex2 | Not Found | N/A | N/A | N/A | 23 | 5.1 | 7.2 | 49 | Unknown | N/A | Unknown |
100 | 20 | Ex2 | Not Found | N/A | N/A | N/A | 38 | N/A | N/A | N/A | Unknown | 46, XX, +21, −7 | Unknown |
101 | 38 | Ex2 | Not Found | N/A | N/A | N/A | 21 | 11.9 | 7.3 | 34 | Unknown | 47, XX, +21c | CCR |
102 | 10 | Ex2 | Not Found | N/A | N/A | N/A | 10 | 3.9 | 10.9 | 65 | Unknown | N/A | Unknown |
103 | 20 | Ex2 | Not Found | N/A | N/A | N/A | 12 | 3.8 | 8.6 | 16 | Unknown | 47, XX, t(1;22)(q23;p13), +21c[9]/ 47, XX, +21c[4] | CCR |
WBC indicates white blood cell; Hb, hemoglobin; Plt, platelet; Del, deletion of nucleotides; CCR, complete clinical remission; Dup, duplication of nucleotides; N/A, not available; Ins, insertion of nucleotides; Point, point substitution; and N/D, not done.
Exon number containing the mutation as defined by WAVE analysis.
Nucleotide 0 is the first nucleotide of GATA1 exon 1 including exons and introns. NCBI reference NT_079573.4 (Homo sapiens chromosome X genomic contig, starting position 11496706) was used.
Patients with TMD progressed to ML-DS.