Up-regulated genes in PCNSL
| PCNSL versus normal LN (present study) . | PCNSL versus non-CNS DLBCL . | |||||
|---|---|---|---|---|---|---|
| Probe ID . | Gene . | P (FWER) . | Rank . | Gene by Tun et al6 . | Gene by Tun et al6 . | Gene by Rubenstein et al7 . |
| A_23_P2181 | CYB5R2 | .001 | 1 | SPP1 | RGS13 | MYC |
| A_24_P157370 | IL 17RB | .002 | 4 | TF | FCGR3A | MINA |
| A_24_P366315 | KIF21A | .003 | 7 | DDR1 | CNP | EIF5 |
| A_32_P85405 | Not found | .006 | 8 | NM_178012 | FBP1 | EIF4A |
| A_23_P3371 | RASGRF1 | .006 | 10 | SERPINA3 | BC000525 | CUL5 |
| A_32_P125808 | Not found | .008 | 14 | S-100B | BMP7 | E2F5 |
| A_23_P97473 | MRPL20 | .009 | 17 | C9orf58 | NM_013332 | BUB3 |
| A_24_P880000 | Not found | .011 | 20 | BC020630 | C1QB | PIM1 |
| A_32_P23525 | Not found | .012 | 22 | CRYAB | IRF4 | JAK1 |
| A_23_P325642 | PDIA2 | .015 | 23 | NM_018584 | DECR2 | XBP1 |
| A_23_P77201 | C15orf41 | .015 | 26 | AF034208 | ATF6 | |
| A_23_P3379 | RASGRF1 | .016 | 29 | CXCL13 | PDCD4 | |
| A_23_P420610 | FCHO2 | .017 | 31 | NM_152680 | FAF1 | |
| A_24_P392265 | EXOC5 | .023 | 38 | TCL1A | CFLAR0 | |
| A_23_P205007 | IPO5 | .025 | 42 | DKK3 | ITGAE | |
| A_24_P31165 | GFAP | .026 | 45 | FOXG1B | CTSD | |
| A_23_P170761 | PDLIM5 | .026 | 46 | UGT2B17 | ||
| A_24_P281923 | DLAT | .026 | 48 | TACSTD1 | ||
| A_23_P329133 | GOT2 | .026 | 50 | FEZ1 | ||
| A_24_P288754 | PIGA | .027 | 52 | CHI3L1 | ||
| A_23_P68998 | MIOX | .030 | 61 | CA2 | ||
| A_23_P216080 | HOOK3 | .031 | 67 | MGST1 | ||
| A_32_P89691 | SORD | .033 | 73 | DNAJC12 | ||
| A_23_P117411 | FOXG1 | .039 | 78 | AK097976 | ||
| A_23_P106575 | GOT2 | .040 | 79 | NM_018357 | ||
| A_23_P29153 | RTDR1 | .042 | 82 | HBA2 | ||
| A_23_P91081 | TACSTD1 | .045 | 89 | NM_024897 | ||
| PCNSL versus normal LN (present study) . | PCNSL versus non-CNS DLBCL . | |||||
|---|---|---|---|---|---|---|
| Probe ID . | Gene . | P (FWER) . | Rank . | Gene by Tun et al6 . | Gene by Tun et al6 . | Gene by Rubenstein et al7 . |
| A_23_P2181 | CYB5R2 | .001 | 1 | SPP1 | RGS13 | MYC |
| A_24_P157370 | IL 17RB | .002 | 4 | TF | FCGR3A | MINA |
| A_24_P366315 | KIF21A | .003 | 7 | DDR1 | CNP | EIF5 |
| A_32_P85405 | Not found | .006 | 8 | NM_178012 | FBP1 | EIF4A |
| A_23_P3371 | RASGRF1 | .006 | 10 | SERPINA3 | BC000525 | CUL5 |
| A_32_P125808 | Not found | .008 | 14 | S-100B | BMP7 | E2F5 |
| A_23_P97473 | MRPL20 | .009 | 17 | C9orf58 | NM_013332 | BUB3 |
| A_24_P880000 | Not found | .011 | 20 | BC020630 | C1QB | PIM1 |
| A_32_P23525 | Not found | .012 | 22 | CRYAB | IRF4 | JAK1 |
| A_23_P325642 | PDIA2 | .015 | 23 | NM_018584 | DECR2 | XBP1 |
| A_23_P77201 | C15orf41 | .015 | 26 | AF034208 | ATF6 | |
| A_23_P3379 | RASGRF1 | .016 | 29 | CXCL13 | PDCD4 | |
| A_23_P420610 | FCHO2 | .017 | 31 | NM_152680 | FAF1 | |
| A_24_P392265 | EXOC5 | .023 | 38 | TCL1A | CFLAR0 | |
| A_23_P205007 | IPO5 | .025 | 42 | DKK3 | ITGAE | |
| A_24_P31165 | GFAP | .026 | 45 | FOXG1B | CTSD | |
| A_23_P170761 | PDLIM5 | .026 | 46 | UGT2B17 | ||
| A_24_P281923 | DLAT | .026 | 48 | TACSTD1 | ||
| A_23_P329133 | GOT2 | .026 | 50 | FEZ1 | ||
| A_24_P288754 | PIGA | .027 | 52 | CHI3L1 | ||
| A_23_P68998 | MIOX | .030 | 61 | CA2 | ||
| A_23_P216080 | HOOK3 | .031 | 67 | MGST1 | ||
| A_32_P89691 | SORD | .033 | 73 | DNAJC12 | ||
| A_23_P117411 | FOXG1 | .039 | 78 | AK097976 | ||
| A_23_P106575 | GOT2 | .040 | 79 | NM_018357 | ||
| A_23_P29153 | RTDR1 | .042 | 82 | HBA2 | ||
| A_23_P91081 | TACSTD1 | .045 | 89 | NM_024897 | ||
LN indicates lymph node.