Table 1

CIS genes targeted multiple times (N Hits) within the integration datasets

No. of hitsGenes (interval in Kb)
CARD8 (23), NSD1 (90), QRICH1 (31), SAPS2 (47), USP48 (48) 
GPATCH8 (53) 
FCHSD2 (272) 
NPLOC4 (76), SMARCC1 (95), NF1 (140) 
PACS1 (110), HLA (542) 
FBXL11 (107) 
No. of hitsGenes (interval in Kb)
CARD8 (23), NSD1 (90), QRICH1 (31), SAPS2 (47), USP48 (48) 
GPATCH8 (53) 
FCHSD2 (272) 
NPLOC4 (76), SMARCC1 (95), NF1 (140) 
PACS1 (110), HLA (542) 
FBXL11 (107) 

The maximum distance between integrations targeting the same CIS is indicated. Note that only CIS genes targeted by ≥ 4 integrations are shown. With the exception of SAPS2 and USP48, all other CIS genes found in our experimental dataset matched the CISs of the ALD clinical trial. See supplemental Table 2 for further details on the identified CISs.

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