SHM characteristics in the most common IGHV families
. | No. of sequences . | No. of mutations . | R/S ratio . | Transitions/transversions . | % of mutations within RGYW . | % of nucleotides within RGYW . | ||||
---|---|---|---|---|---|---|---|---|---|---|
Total . | CDR . | FR . | Total . | CDR . | FR . | |||||
HCLc | ||||||||||
IGHV1c | 15 | 242 | 1.66 | 2.95 | 1.3 | 1.57 | 1.76 | 1.26 | 16.94 | 3.96 |
IGHV3c | 55 | 705 | 1.92 | 2.73 | 1.52 | 1.50 | 1.40 | 1.66 | 13.62 | 3.09 |
IGHV4c | 24 | 213 | 1.73 | 4.40 | 1.31 | 1.24 | 1.37 | 0.93 | 12.68 | 3.71 |
HCLv | ||||||||||
IGHV1v | 2 | 45 | 2 | 3 | 1.64 | 1.14 | 1.42 | 0.78 | 13.33 | 3.72 |
IGHV3v | 7 | 111 | 1.89 | 2.25 | 1.73 | 0.76 | 0.63 | 1.05 | 8.11 | 3.19 |
IGHV4v | 16 | 64 | 1.75 | 1.38 | 2 | 2.05 | 2.46 | 1.38 | 6.25 | 3.88 |
. | No. of sequences . | No. of mutations . | R/S ratio . | Transitions/transversions . | % of mutations within RGYW . | % of nucleotides within RGYW . | ||||
---|---|---|---|---|---|---|---|---|---|---|
Total . | CDR . | FR . | Total . | CDR . | FR . | |||||
HCLc | ||||||||||
IGHV1c | 15 | 242 | 1.66 | 2.95 | 1.3 | 1.57 | 1.76 | 1.26 | 16.94 | 3.96 |
IGHV3c | 55 | 705 | 1.92 | 2.73 | 1.52 | 1.50 | 1.40 | 1.66 | 13.62 | 3.09 |
IGHV4c | 24 | 213 | 1.73 | 4.40 | 1.31 | 1.24 | 1.37 | 0.93 | 12.68 | 3.71 |
HCLv | ||||||||||
IGHV1v | 2 | 45 | 2 | 3 | 1.64 | 1.14 | 1.42 | 0.78 | 13.33 | 3.72 |
IGHV3v | 7 | 111 | 1.89 | 2.25 | 1.73 | 0.76 | 0.63 | 1.05 | 8.11 | 3.19 |
IGHV4v | 16 | 64 | 1.75 | 1.38 | 2 | 2.05 | 2.46 | 1.38 | 6.25 | 3.88 |