Top 10 fold up-regulated genes
| Cluster/probe set . | Gene symbol . | Fold change . |
|---|---|---|
| CD-2 | ||
| 208711_s_at | CCND1 | 78.43 |
| 228592_at | MS4A1 | 52.20 |
| 208712_at | CCND1 | 34.84 |
| 223823_at | KCNMB2 | 21.04 |
| 235518_at | SLC8A1 | 17.57 |
| 220068_at | VPREB3 | 13.64 |
| 210356_x_at | MS4A1 | 13.49 |
| 228599_at | MS4A1 | 13.16 |
| 225842_at | PHLDA1 | 12.81 |
| 217418_x_at | MS4A1 | 11.31 |
| CD-1 | ||
| 230493_at | SHISA2 | 29.08 |
| 235278_at | MACROD2 | 17.77 |
| 210587_at | INHBE | 13.97 |
| 218589_at | P2RY5 | 12.52 |
| 206760_s_at | FCER2 | 12.17 |
| 207076_s_at | ASS1 | 11.14 |
| 223823_at | KCNMB2 | 11.07 |
| 206759_at | FCER2 | 9.78 |
| 221911_at | ETV1 | 9.33 |
| 225285_at | BCAT1 | 8.83 |
| CTA | ||
| 210387_at | HIST1H2BG | 7.59 |
| 206102_at | GINS1 | 5.01 |
| 208955_at | DUT | 4.94 |
| 238021_s_at | hCG_1815491 | 4.79 |
| 238762_at | MTHFD2L | 4.58 |
| 206834_at | HBB, HBD | 4.57 |
| 227212_s_at | PHF19 | 4.55 |
| 202016_at | MEST | 4.45 |
| 203213_at | CDC2 | 4.22 |
| 238022_at | hCG_1815491 | 4.16 |
| NFκB | ||
| 214230_at | CDC42 | 19.17 |
| 202643_s_at | TNFAIP3 | 11.73 |
| 211032_at | COBLL1 | 10.87 |
| 1557257_at | BCL10 | 10.20 |
| 1559249_at | ATXN1 | 9.52 |
| 208622_s_at | EZR | 8.62 |
| 230082_at | LOC100133660 | 8.57 |
| 1554229_at | C5orf41 | 8.05 |
| 238633_at | EPC1 | 7.96 |
| 1552542_s_at | TAGAP7 | 7.84 |
| HY | ||
| 222943_at | GBA3 | 8.28 |
| 219954_s_at | GBA3 | 5.78 |
| 219463_at | C20orf103 | 5.15 |
| 203153_at | IFIT1 | 5.08 |
| 214329_x_at | TNFSF10 | 5.01 |
| 202687_s_at | TNFSF10 | 4.80 |
| 212843_at | NCAM1 | 4.57 |
| 205051_s_at | KIT | 4.55 |
| 202688_at | TNFSF10 | 4.49 |
| 206609_at | MAGEC1 | 4.43 |
| PRL3 | ||
| 200953_s_at | CCND2 | 19.28 |
| 206574_s_at | PTP4A3 | 15.66 |
| 209695_at | PTP4A3 | 15.11 |
| 204469_at | PTPRZ1 | 9.73 |
| 227697_at | SOCS3 | 5.93 |
| 217865_at | RNF130 | 5.89 |
| 209183_s_at | C10orf10 | 4.40 |
| 218788_s_at | SMYD3 | 4.11 |
| 228051_at | KIAA1244 | 3.82 |
| 219195_at | PPARGC1A | 3.69 |
| PR | ||
| 232231_at | RUNX2 | 14.43 |
| 210432_s_at | SCN3A | 7.64 |
| 206640_x_at | [multiple gene symbols] | 7.21 |
| 203213_at | CDC2 | 7.04 |
| 206102_at | GINS1 | 6.80 |
| 208235_x_at | GAGE12F, GAGE12 | 6.76 |
| 201292_at | TOP2A | 6.74 |
| 207739_s_at | [multiple gene symbols] | 6.50 |
| 214070_s_at | ATP10B | 6.39 |
| 201291_s_at | TOP2A | 6.38 |
| MF | ||
| 200953_s_at | CCND2 | 17.72 |
| 212724_at | RND3 | 15.84 |
| 211986_at | AHNAK | 12.55 |
| 200951_s_at | CCND2 | 11.03 |
| 226875_at | DOCK11 | 6.95 |
| 202207_at | ARL4C | 6.77 |
| 205590_at | RASGRP1 | 6.70 |
| 204589_at | NUAK1 | 5.95 |
| 218935_at | EHD3 | 5.54 |
| 226961_at | PRR15 | 5.23 |
| MS | ||
| 204379_s_at | FGFR3 | 153.02 |
| 222777_s_at | WHSC1 | 45.72 |
| 200953_s_at | CCND2 | 35.57 |
| 217901_at | DSG2 | 23.53 |
| 201387_s_at | UCHL1 | 22.40 |
| 212190_at | SERPINE2 | 21.45 |
| 222778_s_at | WHSC1 | 20.47 |
| 217963_s_at | NGFRAP1 | 17.83 |
| 209053_s_at | WHSC1 | 16.52 |
| 212771_at | C10orf38 | 16.29 |
| Myeloid | ||
| 206111_at | [multiple gene symbols] | 12.54 |
| 205033_s_at | DEFA1, DEFA3, LOC7 | 10.01 |
| 215051_x_at | AIF1 | 9.24 |
| 201137_s_at | HLA-DPB1 | 8.33 |
| 207269_at | DEFA4 | 7.95 |
| 202917_s_at | S100A8 | 7.93 |
| 213975_s_at | LYZ | 7.84 |
| 205950_s_at | CA1 | 7.77 |
| 215193_x_at | [multiple gene symbols] | 7.66 |
| 203645_s_at | CD163 | 7.64 |
| Cluster/probe set . | Gene symbol . | Fold change . |
|---|---|---|
| CD-2 | ||
| 208711_s_at | CCND1 | 78.43 |
| 228592_at | MS4A1 | 52.20 |
| 208712_at | CCND1 | 34.84 |
| 223823_at | KCNMB2 | 21.04 |
| 235518_at | SLC8A1 | 17.57 |
| 220068_at | VPREB3 | 13.64 |
| 210356_x_at | MS4A1 | 13.49 |
| 228599_at | MS4A1 | 13.16 |
| 225842_at | PHLDA1 | 12.81 |
| 217418_x_at | MS4A1 | 11.31 |
| CD-1 | ||
| 230493_at | SHISA2 | 29.08 |
| 235278_at | MACROD2 | 17.77 |
| 210587_at | INHBE | 13.97 |
| 218589_at | P2RY5 | 12.52 |
| 206760_s_at | FCER2 | 12.17 |
| 207076_s_at | ASS1 | 11.14 |
| 223823_at | KCNMB2 | 11.07 |
| 206759_at | FCER2 | 9.78 |
| 221911_at | ETV1 | 9.33 |
| 225285_at | BCAT1 | 8.83 |
| CTA | ||
| 210387_at | HIST1H2BG | 7.59 |
| 206102_at | GINS1 | 5.01 |
| 208955_at | DUT | 4.94 |
| 238021_s_at | hCG_1815491 | 4.79 |
| 238762_at | MTHFD2L | 4.58 |
| 206834_at | HBB, HBD | 4.57 |
| 227212_s_at | PHF19 | 4.55 |
| 202016_at | MEST | 4.45 |
| 203213_at | CDC2 | 4.22 |
| 238022_at | hCG_1815491 | 4.16 |
| NFκB | ||
| 214230_at | CDC42 | 19.17 |
| 202643_s_at | TNFAIP3 | 11.73 |
| 211032_at | COBLL1 | 10.87 |
| 1557257_at | BCL10 | 10.20 |
| 1559249_at | ATXN1 | 9.52 |
| 208622_s_at | EZR | 8.62 |
| 230082_at | LOC100133660 | 8.57 |
| 1554229_at | C5orf41 | 8.05 |
| 238633_at | EPC1 | 7.96 |
| 1552542_s_at | TAGAP7 | 7.84 |
| HY | ||
| 222943_at | GBA3 | 8.28 |
| 219954_s_at | GBA3 | 5.78 |
| 219463_at | C20orf103 | 5.15 |
| 203153_at | IFIT1 | 5.08 |
| 214329_x_at | TNFSF10 | 5.01 |
| 202687_s_at | TNFSF10 | 4.80 |
| 212843_at | NCAM1 | 4.57 |
| 205051_s_at | KIT | 4.55 |
| 202688_at | TNFSF10 | 4.49 |
| 206609_at | MAGEC1 | 4.43 |
| PRL3 | ||
| 200953_s_at | CCND2 | 19.28 |
| 206574_s_at | PTP4A3 | 15.66 |
| 209695_at | PTP4A3 | 15.11 |
| 204469_at | PTPRZ1 | 9.73 |
| 227697_at | SOCS3 | 5.93 |
| 217865_at | RNF130 | 5.89 |
| 209183_s_at | C10orf10 | 4.40 |
| 218788_s_at | SMYD3 | 4.11 |
| 228051_at | KIAA1244 | 3.82 |
| 219195_at | PPARGC1A | 3.69 |
| PR | ||
| 232231_at | RUNX2 | 14.43 |
| 210432_s_at | SCN3A | 7.64 |
| 206640_x_at | [multiple gene symbols] | 7.21 |
| 203213_at | CDC2 | 7.04 |
| 206102_at | GINS1 | 6.80 |
| 208235_x_at | GAGE12F, GAGE12 | 6.76 |
| 201292_at | TOP2A | 6.74 |
| 207739_s_at | [multiple gene symbols] | 6.50 |
| 214070_s_at | ATP10B | 6.39 |
| 201291_s_at | TOP2A | 6.38 |
| MF | ||
| 200953_s_at | CCND2 | 17.72 |
| 212724_at | RND3 | 15.84 |
| 211986_at | AHNAK | 12.55 |
| 200951_s_at | CCND2 | 11.03 |
| 226875_at | DOCK11 | 6.95 |
| 202207_at | ARL4C | 6.77 |
| 205590_at | RASGRP1 | 6.70 |
| 204589_at | NUAK1 | 5.95 |
| 218935_at | EHD3 | 5.54 |
| 226961_at | PRR15 | 5.23 |
| MS | ||
| 204379_s_at | FGFR3 | 153.02 |
| 222777_s_at | WHSC1 | 45.72 |
| 200953_s_at | CCND2 | 35.57 |
| 217901_at | DSG2 | 23.53 |
| 201387_s_at | UCHL1 | 22.40 |
| 212190_at | SERPINE2 | 21.45 |
| 222778_s_at | WHSC1 | 20.47 |
| 217963_s_at | NGFRAP1 | 17.83 |
| 209053_s_at | WHSC1 | 16.52 |
| 212771_at | C10orf38 | 16.29 |
| Myeloid | ||
| 206111_at | [multiple gene symbols] | 12.54 |
| 205033_s_at | DEFA1, DEFA3, LOC7 | 10.01 |
| 215051_x_at | AIF1 | 9.24 |
| 201137_s_at | HLA-DPB1 | 8.33 |
| 207269_at | DEFA4 | 7.95 |
| 202917_s_at | S100A8 | 7.93 |
| 213975_s_at | LYZ | 7.84 |
| 205950_s_at | CA1 | 7.77 |
| 215193_x_at | [multiple gene symbols] | 7.66 |
| 203645_s_at | CD163 | 7.64 |
Per cluster, the top 10 up-regulated genes are shown. The first column shows the cluster and probe set IDs, the second column shows the gene symbols, and the third column indicates the fold change differences of per probe set in the specific cluster versus the remaining clusters.
CTA indicates cancer testis antigens; HY, hyperdiploid cluster; NFκB, nuclear factor kappa light-chain-enhancer of activated B cells; and PR, proliferation-associated genes.