Table 4

Frequencies of other SNPs in PV and ET versus controls

SNP minor allele frequency
rs318699 EpoRrs2279784 3q21rs12500918 4q31rs1524395 7p11
PV 0.310 (n = 163) 0.088 (n = 152) 0.446 (n = 147) 0.303 (n = 152) 
ET 0.342 (n = 753) 0.085 (n = 763) 0.436 (n = 763) 0.315 (n = 762) 
Controls 0.374 (n = 1495) 0.076* (n = 224) 0.466 (n = 1491) 0.309 (n = 1499) 
P     
    PV versus ET .122 .824 .797 .685 
    PV versus controls .025 .587 .501 .986 
    ET versus controls .245 .560 .054 .659 
SNP minor allele frequency
rs318699 EpoRrs2279784 3q21rs12500918 4q31rs1524395 7p11
PV 0.310 (n = 163) 0.088 (n = 152) 0.446 (n = 147) 0.303 (n = 152) 
ET 0.342 (n = 753) 0.085 (n = 763) 0.436 (n = 763) 0.315 (n = 762) 
Controls 0.374 (n = 1495) 0.076* (n = 224) 0.466 (n = 1491) 0.309 (n = 1499) 
P     
    PV versus ET .122 .824 .797 .685 
    PV versus controls .025 .587 .501 .986 
    ET versus controls .245 .560 .054 .659 

PV indicates polycythemia vera; ET, essential thrombocythemia; and WTCCC, Wellcome Trust Case Control Consortium.

*

Allele frequency derived by pyrosequencing of 224 healthy United Kingdom persons; other controls are from the WTCCC.

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