Oligonucleotides and primers used in experiments
| Experiment/primer name . | Primer sequence, 5′ to 3′ . |
|---|---|
| Southern probe | |
| Ex 2′ | GAACATCATGACAACAG |
| ChIP/ChRIP analysis | |
| MEx2-S | GAGTTTAGCGGCTGAAGCTGAGA |
| Up1-S | AAACACACAGGTGCCTGAGCA |
| Up2-As | GCATACTGGGACTTGGGGGTT |
| Up3-S | AGGTCAAAATTCCCTAGGTGCA |
| Up4-As | TGAACTTCCGTGTGGGCTGTCA |
| mEx17-RT | CTCCAGTAGGGACTTGCCCGTTGATGTTAAGA |
| Ex13-S | AGAGCCCACAGAAGCATGGA |
| Ex17-As | GTGTGTAGATAAGCCCTTGTCCCA |
| Experiment/primer name . | Primer sequence, 5′ to 3′ . |
|---|---|
| Southern probe | |
| Ex 2′ | GAACATCATGACAACAG |
| ChIP/ChRIP analysis | |
| MEx2-S | GAGTTTAGCGGCTGAAGCTGAGA |
| Up1-S | AAACACACAGGTGCCTGAGCA |
| Up2-As | GCATACTGGGACTTGGGGGTT |
| Up3-S | AGGTCAAAATTCCCTAGGTGCA |
| Up4-As | TGAACTTCCGTGTGGGCTGTCA |
| mEx17-RT | CTCCAGTAGGGACTTGCCCGTTGATGTTAAGA |
| Ex13-S | AGAGCCCACAGAAGCATGGA |
| Ex17-As | GTGTGTAGATAAGCCCTTGTCCCA |
ChIP/ChRIP indicates chromatin immunoprecipitation/immunoprecipitation of chromatin–RNA complexes.