Table 1

Baseline patient characteristics

CharacteristicSNP-A (TET2 seq), n
Median age, y (range) 68 (19-92) 
Risk stratification by WHO*  
    Low risk 227 (28) 
    High risk 169 (31) 
IPSS risk category  
    Low/Int-1 199 (27) 
    High/Int-2 82 (15) 
    Unclassified 114 (17) 
    No growth by MC 19 (5) 
    Clinical data not available 23 (2) 
    Others 73 (10) 
WHO classification  
    MDS 235 (14) 
        RA/RCMD/5q− syndrome/MDS-U 117 (4) 
        RARS/RCMD-RS 51 (6) 
        RAEB-1/2 67 (4) 
    MDS/MPN overlap 80 (30) 
        CMML-1/2 46 (17) 
        MDS/MPN-U§ 21 (5) 
        RARS-T 13 (3) 
        JMML 0 (5) 
    AML 81 (20) 
        2° to MDS 71 (7) 
        2° to MDS/MPN 10 (14) 
        2° to MPN 1 (1) 
    MPN 2 (2) 
CharacteristicSNP-A (TET2 seq), n
Median age, y (range) 68 (19-92) 
Risk stratification by WHO*  
    Low risk 227 (28) 
    High risk 169 (31) 
IPSS risk category  
    Low/Int-1 199 (27) 
    High/Int-2 82 (15) 
    Unclassified 114 (17) 
    No growth by MC 19 (5) 
    Clinical data not available 23 (2) 
    Others 73 (10) 
WHO classification  
    MDS 235 (14) 
        RA/RCMD/5q− syndrome/MDS-U 117 (4) 
        RARS/RCMD-RS 51 (6) 
        RAEB-1/2 67 (4) 
    MDS/MPN overlap 80 (30) 
        CMML-1/2 46 (17) 
        MDS/MPN-U§ 21 (5) 
        RARS-T 13 (3) 
        JMML 0 (5) 
    AML 81 (20) 
        2° to MDS 71 (7) 
        2° to MDS/MPN 10 (14) 
        2° to MPN 1 (1) 
    MPN 2 (2) 

An additional 9 patients screened for TET2 mutation but no SNP-A analysis.

AML indicates acute myelogenous leukemia; FAB, French-American-British; IPSS, International Prognostic Scoring System; JMML, juvenile myelomonocytic leukemia; MC, metaphase cytogenetics; MDS, myelodysplastic syndrome; MPN, myeloproliferative neoplasm; MDS/MPN-U, MDS/MPN unclassifiable; MDS-U, MDS unclassified; RA, refractory anemia; RAEB, refractory anemia with excess blasts; RAEB-T, refractory anemia with excess blasts in transformation; RARS, refractory anemia with ringed sideroblasts; RARS-T, refractory anemia with ringed sideroblasts associated with marked thrombocytosis; RCMD, refractory cytopenia with multilineage dysplasia; RCMD-RS, refractory cytopenia with multilineage dysplasia and ringed sideroblasts; and WHO, World Health Organization.

*

Low risk includes RA, RARS, RCMD, RCMD-RS, CMML-1, MDS/MPN-U < 5% blast, RARS-T, MDS-U, and 5q- syndrome. High risk includes RAEB-1/2, CMML-2, MDS/MPN-U ≥ 5% blasts, AML.

Patients with MPN and JMML are excluded.

AML with ≥ 30% BM blast or previously treated prior to sample collection.

§

One patient is classified as aCML.

Twenty-nine patients are classified as RAEB-T by FAB classification.

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