HCV core envelope 1 isolates homologous with PHC09
| Clones . | Homology, % . | HCV sequence . | HCV gene . |
|---|---|---|---|
| PHC09 | 190SAIHIRASG199 | Core envelope 1 (HCV,6) | |
| PHC09-H1 | 60 | SAYQVRNSSG | Core envelope 1 (HCV,1a) |
| PHC09-H2 | 50 | SAYQVRNSTG | Core envelope 1 (HCV,1a) |
| PHC09-H3 | 60 | SAYEVRNVSG | Core envelope 1 (HCV,1b) |
| PHC09-H4 | 70 | SAYHVRNSSG | Core envelope 1 (HCV,1a) |
| PHC09-H5 | 70 | SAIEVRNVSG | Core envelope 1 (HCV,1b) |
| PHC09-H6 | 70 | SAYEVRNASG | Core envelope 1 (HCV,1b) |
| Clones . | Homology, % . | HCV sequence . | HCV gene . |
|---|---|---|---|
| PHC09 | 190SAIHIRASG199 | Core envelope 1 (HCV,6) | |
| PHC09-H1 | 60 | SAYQVRNSSG | Core envelope 1 (HCV,1a) |
| PHC09-H2 | 50 | SAYQVRNSTG | Core envelope 1 (HCV,1a) |
| PHC09-H3 | 60 | SAYEVRNVSG | Core envelope 1 (HCV,1b) |
| PHC09-H4 | 70 | SAYHVRNSSG | Core envelope 1 (HCV,1a) |
| PHC09-H5 | 70 | SAIEVRNVSG | Core envelope 1 (HCV,1b) |
| PHC09-H6 | 70 | SAYEVRNASG | Core envelope 1 (HCV,1b) |
Candidate clone PHC09 is located in a hepatitis C virus nonconserved region. H1-H6 represent homologous PHC09 isolates. The underlined regions denote an identical amino acid sequence between screened 7-mer peptide and PHC09. Bold letters represent identical amino acid sequence between 10-mer PHC09 and PHC09 isolates. Column 1 denotes the percentage homology of the isolates. Superscript numbers refer to amino acid position in HCV core envelope 1.