Prognostic genes identified in prior studies of CHOP-treated patients assessed using ArrayPlate
| Accession no. . | Name in original reference . | ArrayPlate name . | Reference (gene order within reference) . |
|---|---|---|---|
| NM_138931 | BCL6 | BCL6 | Rosenwald et al1 (1), Lossos et al4 (6) |
| NM_175739 | IMAGE 1334260 | GCET1 (SERPINA9) | Rosenwald et al1 (2) |
| NM_152785 | IMAGE 814622 | GCET2 | Rosenwald et al1 (3) |
| NM_033554 | HLA-DPα | HLA-DPA1 | Rosenwald et al1 (4) |
| NM_002122 | HLA-DQα | HLA-DQA1 | Rosenwald et al1 (5) |
| NM_019111 | HLA-DRα | HLA-DRA | Rosenwald et al1 (6) |
| NM_002124 | HLA-DRβ | HLA-DRB | Rosenwald et al1 (7) |
| NM_001102 | α-Actinin | ACTN1 | Rosenwald et al1 (8) |
| NM_000090 | Collagen type III α1 | COL3A1 | Rosenwald et al1 (9) |
| NM_001901 | Connective-tissue growth factor | CTGF | Rosenwald et al1 (10) |
| NM_212482 | Fibronectin | FN1 | Rosenwald et al1 (11), Lossos et al4 (5) |
| NM_014745 | KIAA0233 | FAM38A | Rosenwald et al1 (12) |
| NM_002658 | Urokinase plasminogen activator | PLAU | Rosenwald et al1 (13) |
| NM_002467 | MYC | MYC | Rosenwald et al1 (14) |
| NM_019095 | E21G3 (Nucleostemin) | C20orf155 | Rosenwald et al1 (15) |
| NM_006993 | NPM3 | NPM3 | Rosenwald et al1 (16) |
| NM_001718 | BMP6 | BMP6 | Rosenwald et al1 (17) |
| NM_005574 | LM02 | LMO2 | Lossos et al4 (1) |
| NM_000633 | BCL2 | BCL2 | Lossos et al4 (2) |
| NM_002983.1 | SCYA3 | CCL3 | Lossos et al4 (3) |
| NM_001759.2 | CCND2 | CCND2 | Lossos et al4 (4) |
| NM_001939 | DRP2 dystrophin related protein 2 | DRP2 | Shipp et al3 (1) |
| NM_002738 | PRKACB protein kinase C-beta-1 | PRKCB1 | Shipp et al3 (2) |
| NM_014456 | H731 nuclear antigen | PDCD4 | Shipp et al3 (3) |
| NM_005909 | 3′ UTR of unknown protein | MAP1B | Shipp et al3 (4) |
| NM_005077 | Transducin-like enhancer protein 1 | TLE1 | Shipp et al3 (5) |
| NM_014251 | Uncharacterized | SLC25A13 | Shipp et al3 (6) |
| NM_002600 | Phosphodiesterase 4B, cAMP-specific (PDE4B) | PDE4B | Shipp et al3 (7) |
| NM_001497 | UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 1 | B4GALT1 | Shipp et al3 (8) |
| NM_002739 | Protein kinase C, gamma (PRKCG) | PRKCG | Shipp et al3 (9) |
| NM_002557 | Oviductal glycoprotein | OVGP1 | Shipp et al3 (10) |
| NM_173198 | Mitogen induced nuclear orphan receptor (MINOR) | NR4A3 | Shipp et al3 (11) |
| NM_012256 | Zinc-finger protein C2H2-150 | ZNF212 | Shipp et al3 (12) |
| NM_000867 | 5-Hydroxytryptamine 2B receptor | HTR2B | Shipp et al3 (13) |
| NM_001752 | Catalase | CAT | Tome et al2 (1) |
| NM_000636 | Manganese superoxide dismutase | SOD2 | Tome et al2 (2) |
| M34960 | TATA box binding protein | TBP | Lossos et al13 |
| Accession no. . | Name in original reference . | ArrayPlate name . | Reference (gene order within reference) . |
|---|---|---|---|
| NM_138931 | BCL6 | BCL6 | Rosenwald et al1 (1), Lossos et al4 (6) |
| NM_175739 | IMAGE 1334260 | GCET1 (SERPINA9) | Rosenwald et al1 (2) |
| NM_152785 | IMAGE 814622 | GCET2 | Rosenwald et al1 (3) |
| NM_033554 | HLA-DPα | HLA-DPA1 | Rosenwald et al1 (4) |
| NM_002122 | HLA-DQα | HLA-DQA1 | Rosenwald et al1 (5) |
| NM_019111 | HLA-DRα | HLA-DRA | Rosenwald et al1 (6) |
| NM_002124 | HLA-DRβ | HLA-DRB | Rosenwald et al1 (7) |
| NM_001102 | α-Actinin | ACTN1 | Rosenwald et al1 (8) |
| NM_000090 | Collagen type III α1 | COL3A1 | Rosenwald et al1 (9) |
| NM_001901 | Connective-tissue growth factor | CTGF | Rosenwald et al1 (10) |
| NM_212482 | Fibronectin | FN1 | Rosenwald et al1 (11), Lossos et al4 (5) |
| NM_014745 | KIAA0233 | FAM38A | Rosenwald et al1 (12) |
| NM_002658 | Urokinase plasminogen activator | PLAU | Rosenwald et al1 (13) |
| NM_002467 | MYC | MYC | Rosenwald et al1 (14) |
| NM_019095 | E21G3 (Nucleostemin) | C20orf155 | Rosenwald et al1 (15) |
| NM_006993 | NPM3 | NPM3 | Rosenwald et al1 (16) |
| NM_001718 | BMP6 | BMP6 | Rosenwald et al1 (17) |
| NM_005574 | LM02 | LMO2 | Lossos et al4 (1) |
| NM_000633 | BCL2 | BCL2 | Lossos et al4 (2) |
| NM_002983.1 | SCYA3 | CCL3 | Lossos et al4 (3) |
| NM_001759.2 | CCND2 | CCND2 | Lossos et al4 (4) |
| NM_001939 | DRP2 dystrophin related protein 2 | DRP2 | Shipp et al3 (1) |
| NM_002738 | PRKACB protein kinase C-beta-1 | PRKCB1 | Shipp et al3 (2) |
| NM_014456 | H731 nuclear antigen | PDCD4 | Shipp et al3 (3) |
| NM_005909 | 3′ UTR of unknown protein | MAP1B | Shipp et al3 (4) |
| NM_005077 | Transducin-like enhancer protein 1 | TLE1 | Shipp et al3 (5) |
| NM_014251 | Uncharacterized | SLC25A13 | Shipp et al3 (6) |
| NM_002600 | Phosphodiesterase 4B, cAMP-specific (PDE4B) | PDE4B | Shipp et al3 (7) |
| NM_001497 | UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 1 | B4GALT1 | Shipp et al3 (8) |
| NM_002739 | Protein kinase C, gamma (PRKCG) | PRKCG | Shipp et al3 (9) |
| NM_002557 | Oviductal glycoprotein | OVGP1 | Shipp et al3 (10) |
| NM_173198 | Mitogen induced nuclear orphan receptor (MINOR) | NR4A3 | Shipp et al3 (11) |
| NM_012256 | Zinc-finger protein C2H2-150 | ZNF212 | Shipp et al3 (12) |
| NM_000867 | 5-Hydroxytryptamine 2B receptor | HTR2B | Shipp et al3 (13) |
| NM_001752 | Catalase | CAT | Tome et al2 (1) |
| NM_000636 | Manganese superoxide dismutase | SOD2 | Tome et al2 (2) |
| M34960 | TATA box binding protein | TBP | Lossos et al13 |