KDE analysis results in IGHV3-21/IGLV3-21 discordant cases and IGHV1-69/IGLV3-09
Sample ID . | IGK allele configuration . | IGKV . | IGJK . | Frame . | % IGKV homology . | FR, P . | CDR, P . | Replacement mutation . | Silent mutation . | % IGHV homology . | % IGLV homology . | ||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
FR . | CDR . | FR . | CDR . | ||||||||||
CLL1 IGHV3-21/IGLV3-21 | VK-JK-KDE | IGKV1-39 | IGJK3 | + | 96.1 | 0.009 | 0.026 | 3 | 4 | 4 | 0 | 95.4 | 98.9 |
IGKV-KDE | IGKV2D-29 | − | 100 | ||||||||||
CLL2 IGHV3-21/IGLV3-21 | VK-JK-KDE | IGKV1-17 | IGJK4 | + | 93.6 | 0.001 | 0.013 | 5 | 6 | 6 | 1 | 94.7 | 99.6 |
IGKV-KDE | IGKV2-30 | − | 100 | ||||||||||
CLL3 IGHV3-21/IGLV3-21 | VK-JK-KDE | IGKV1-39 | IGJK5 | + | 96.4 | 0.003 | 0.017 | 2 | 4 | 4 | 0 | 96.8 | 99.3 |
IGKV-KDE | IGKV2-28 | − | 100 | ||||||||||
CLL4 IGHV3-21/IGLV3-21 | VK-JK-KDE | IGKV1-9 | IGJK4 | + | 96.8 | 0.009 | 0.012 | 2 | 3 | 4 | 0 | 96.8 | 98.9 |
IGKV-KDE | IGKV1-33 | − | 100 | ||||||||||
CLL5 IGHV3-21/IGLV3-21 | VK-JK-KDE | IGKV3-11 | IGJK5 | + | 97.6 | 0.041 | 0.031 | 2 | 3 | 2 | 0 | 97.2 | 98.3 |
IGKV-KDE | IGKV1-33 | − | 100 | ||||||||||
CLL6 IGHV3-21/IGLV3-21 | IGKV-J | IGKV1-33 | IGJK2 | − | 100 | 97.5 | 98.6 | ||||||
IGKV-KDE | IGKV1-27 | − | 100 | ||||||||||
CLL7 IGHV3-21/IGLV3-21 | IGKV-J | IGKV2-18 | IGJK4 | − | 100 | 97.5 | 98.3 | ||||||
IGKV-KDE | IGKV1-27 | − | 100 | ||||||||||
CLL1 IGHV1-69/IGLV3-09 | IGKV-KDE | IGKV1-16 | − | 100 | 100 | 100 | |||||||
IGKV-KDE | IGKV3-15 | − | 100 | ||||||||||
CLL2 IGHV1-69/IGLV3-09 | IGKV-J | IGKV1-27 | IGJK4 | − | 100 | 99.3 | 100 | ||||||
IGKV-KDE | IGKV3-7 | − | 100 | ||||||||||
CLL3 IGHV1-69/IGLV3-09 | IGKV-KDE | IGKV1-9 | − | 100 | 100 | 100 | |||||||
IGKV-KDE | IGKV4-1 | − | 100 | ||||||||||
CLL4 IGHV1-69/IGLV3-09 | IGKV-J | IGKV1-33 | IGJK3 | − | 100 | 100 | 100 | ||||||
IGKV-KDE | IGKV3-11 | − | 100 |
Sample ID . | IGK allele configuration . | IGKV . | IGJK . | Frame . | % IGKV homology . | FR, P . | CDR, P . | Replacement mutation . | Silent mutation . | % IGHV homology . | % IGLV homology . | ||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
FR . | CDR . | FR . | CDR . | ||||||||||
CLL1 IGHV3-21/IGLV3-21 | VK-JK-KDE | IGKV1-39 | IGJK3 | + | 96.1 | 0.009 | 0.026 | 3 | 4 | 4 | 0 | 95.4 | 98.9 |
IGKV-KDE | IGKV2D-29 | − | 100 | ||||||||||
CLL2 IGHV3-21/IGLV3-21 | VK-JK-KDE | IGKV1-17 | IGJK4 | + | 93.6 | 0.001 | 0.013 | 5 | 6 | 6 | 1 | 94.7 | 99.6 |
IGKV-KDE | IGKV2-30 | − | 100 | ||||||||||
CLL3 IGHV3-21/IGLV3-21 | VK-JK-KDE | IGKV1-39 | IGJK5 | + | 96.4 | 0.003 | 0.017 | 2 | 4 | 4 | 0 | 96.8 | 99.3 |
IGKV-KDE | IGKV2-28 | − | 100 | ||||||||||
CLL4 IGHV3-21/IGLV3-21 | VK-JK-KDE | IGKV1-9 | IGJK4 | + | 96.8 | 0.009 | 0.012 | 2 | 3 | 4 | 0 | 96.8 | 98.9 |
IGKV-KDE | IGKV1-33 | − | 100 | ||||||||||
CLL5 IGHV3-21/IGLV3-21 | VK-JK-KDE | IGKV3-11 | IGJK5 | + | 97.6 | 0.041 | 0.031 | 2 | 3 | 2 | 0 | 97.2 | 98.3 |
IGKV-KDE | IGKV1-33 | − | 100 | ||||||||||
CLL6 IGHV3-21/IGLV3-21 | IGKV-J | IGKV1-33 | IGJK2 | − | 100 | 97.5 | 98.6 | ||||||
IGKV-KDE | IGKV1-27 | − | 100 | ||||||||||
CLL7 IGHV3-21/IGLV3-21 | IGKV-J | IGKV2-18 | IGJK4 | − | 100 | 97.5 | 98.3 | ||||||
IGKV-KDE | IGKV1-27 | − | 100 | ||||||||||
CLL1 IGHV1-69/IGLV3-09 | IGKV-KDE | IGKV1-16 | − | 100 | 100 | 100 | |||||||
IGKV-KDE | IGKV3-15 | − | 100 | ||||||||||
CLL2 IGHV1-69/IGLV3-09 | IGKV-J | IGKV1-27 | IGJK4 | − | 100 | 99.3 | 100 | ||||||
IGKV-KDE | IGKV3-7 | − | 100 | ||||||||||
CLL3 IGHV1-69/IGLV3-09 | IGKV-KDE | IGKV1-9 | − | 100 | 100 | 100 | |||||||
IGKV-KDE | IGKV4-1 | − | 100 | ||||||||||
CLL4 IGHV1-69/IGLV3-09 | IGKV-J | IGKV1-33 | IGJK3 | − | 100 | 100 | 100 | ||||||
IGKV-KDE | IGKV3-11 | − | 100 |