Table 2.

Sequences of GST fusion proteins representing a 21–amino acid segment (aa 167–187) of the extracellular loop of CD20


Clone designation

Sequence of CD20 homolog fused to GST
GST-CD20   C E P A N P S E K N S P S T Q Y C Y S I Q  
GST-CD20 M1   C E P A N P S E K N S P S T Q Y C G S I Q  
GST-CD20 M2   C E P A N P S E K N S P S T Q G C G S I Q  
GST-CD20 M3   C E P G N G S E K N S P S T Q Y C Y S I Q  
GST-CD20 M4
 
C E P A N P S G K N S P S T Q Y C Y S I Q
 

Clone designation

Sequence of CD20 homolog fused to GST
GST-CD20   C E P A N P S E K N S P S T Q Y C Y S I Q  
GST-CD20 M1   C E P A N P S E K N S P S T Q Y C G S I Q  
GST-CD20 M2   C E P A N P S E K N S P S T Q G C G S I Q  
GST-CD20 M3   C E P G N G S E K N S P S T Q Y C Y S I Q  
GST-CD20 M4
 
C E P A N P S G K N S P S T Q Y C Y S I Q
 

Proteins with a mutation of the CD20 sequence are designated M1-M4. The amino acids considered to be important for rituximab binding were replaced by glycine (underlined letters). M4 had a mutation in a region adjacent but outside the ANPS peptide string, which is suspected to be critical for binding of rituximab.

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