Representation of KO in stem/progenitor cell pools
. | . | Clonal analysis of stem/progenitor cells . | . | . | . | ||
---|---|---|---|---|---|---|---|
cBMT*and clonal culture . | Time after cBMT, mo . | No. mice analyzed . | No. colonies assayed . | % KO . | Absolute yield of KO CD34– LKS cells† . | ||
p18–/–‡ | |||||||
II° | |||||||
CD34–LKS | 12 | 3 | 109 | 92.7 | ND | ||
III° | |||||||
CD34–LKS | 8 | 3 | 93 | 76.3 | 3633 ± 356 | ||
p18–/–p21–/– | |||||||
II° | |||||||
CD34–LKS | 16 | 3 | 106 | 99.1 | ND | ||
CFC | 16 | 3 | 88 | 97.7 | – | ||
III° | |||||||
CD34–LKS | 6 | 2 | 91 | 90.1 | ND | ||
CFC | 6 | 2 | 88 | 87.6 | – | ||
IV° | |||||||
CD34–LKS | 10 | 4 | 76 | 78.9 | ND | ||
CFC | 10 | 4 | 37 | 40.5 | – | ||
p21–/–§ | |||||||
I° | |||||||
CD34–LKS | 8 | 3 | 60 | 63.3 | 1452 ± 394 | ||
CFC | 8 | 3 | 67 | 18.9 | – |
. | . | Clonal analysis of stem/progenitor cells . | . | . | . | ||
---|---|---|---|---|---|---|---|
cBMT*and clonal culture . | Time after cBMT, mo . | No. mice analyzed . | No. colonies assayed . | % KO . | Absolute yield of KO CD34– LKS cells† . | ||
p18–/–‡ | |||||||
II° | |||||||
CD34–LKS | 12 | 3 | 109 | 92.7 | ND | ||
III° | |||||||
CD34–LKS | 8 | 3 | 93 | 76.3 | 3633 ± 356 | ||
p18–/–p21–/– | |||||||
II° | |||||||
CD34–LKS | 16 | 3 | 106 | 99.1 | ND | ||
CFC | 16 | 3 | 88 | 97.7 | – | ||
III° | |||||||
CD34–LKS | 6 | 2 | 91 | 90.1 | ND | ||
CFC | 6 | 2 | 88 | 87.6 | – | ||
IV° | |||||||
CD34–LKS | 10 | 4 | 76 | 78.9 | ND | ||
CFC | 10 | 4 | 37 | 40.5 | – | ||
p21–/–§ | |||||||
I° | |||||||
CD34–LKS | 8 | 3 | 60 | 63.3 | 1452 ± 394 | ||
CFC | 8 | 3 | 67 | 18.9 | – |
Ko indicates knock-out; I°, primary; II°, secondary; III°, tertiary; IV°, quaternary; ND, not done; and –, not applicable.
The cBMT procedure was detailed in our previous publication16 and is further illustrated in Figure 2A. Briefly, test cells (2 × 106 BMNCs/host) from p18–/– or p18–/–p21–/– male mice and an equal number of wild-type BMNCs (competitor cells) from male mice (wild-type litter mates in primary cBMT and then 2-month-old wild-type C57BL/6129/SvF1 mice in subsequent rounds of cBMT) were cotransplanted into lethally irradiated (10 Gy) female recipients. Overall engraftment levels in blood are presented in Figure 2C-D
Absolute yield of KO CD34–LSK cells was calculated according to the bone marrow cellularity per harvest (including ilia, femurs, and tibias; n = 8), the frequency (by flow cytometry) of viable CD34–LKS (being able to respond to growth stimuli in vitro) and percentage of KO in CD34–LKS cells. P < .01 (t test, between p18–/– and p21–/– cBMT groups). The lower yield of CD34–LKS cells due to the absence of p21 must have been substantially underestimated since the p18–/– group had undergone 2 additional rounds of cBMT
The representations of p18–/– genotype after after secondary cBMT have been reported in our previous publication.16 All the mice after quaternary cBMT in the p18–/– group developed T-cell leukemia. Characterization of the leukemic cells and relation to HSC regeneration involving a range of analyses are to be reported in a different manuscript41
This experiment was done much later than the other 2 experiments (p18–/– and p18–/–p21–/–) to confirm the accelerated hematopoietic exhaustion due to p21 absence10 as rationalized in the legend of Figure 2D. The competitor cells in all these experiments were from the same type of unmanipulated bone marrow