Table 2.

Apoptosis genes associated with disease-free survival in pediatric ALL


Gene name

Probe set ID

Outcome
BAG1  211475_s_at   0.91  
BAG1  202387_at   0.81  
BAG5  202895_s_at   1.26* 
BAG5  202984_s_at   1.20* 
BCL2L13  217955_at   0.72* 
BID  204493_at   0.87  
BIK  205780_at   0.25* 
XIAP  206537_at   1.30  
CASP9  203984_s_at   0.79  
CYCS  208905_at   0.83  
PECAM-1  208982_at   1.33  
PECAM-1  208981_at   1.66  
CASP1  211367_s_at   0.77  
FAS  216252_x_at   0.99  
TRAIL-R2  210405_x_at   1.73  
TRAIL-R2  209295_at   1.36  
TRAIL-R4
 
210654_at
 
1.53
 

Gene name

Probe set ID

Outcome
BAG1  211475_s_at   0.91  
BAG1  202387_at   0.81  
BAG5  202895_s_at   1.26* 
BAG5  202984_s_at   1.20* 
BCL2L13  217955_at   0.72* 
BID  204493_at   0.87  
BIK  205780_at   0.25* 
XIAP  206537_at   1.30  
CASP9  203984_s_at   0.79  
CYCS  208905_at   0.83  
PECAM-1  208982_at   1.33  
PECAM-1  208981_at   1.66  
CASP1  211367_s_at   0.77  
FAS  216252_x_at   0.99  
TRAIL-R2  210405_x_at   1.73  
TRAIL-R2  209295_at   1.36  
TRAIL-R4
 
210654_at
 
1.53
 

The global test and Wilcoxon rank-sum test with FDR controlled at 5% were performed to identify which of the 118 apoptosis probe sets under study were differentially expressed in leukemic cells taken at initial diagnosis of ALL from patients who achieved and remained in continuous complete remission (CCR) and patients who achieved a complete remission but relapsed during or after completion of chemotherapy. Probe sets selected only by the global test (P < .001).

*

Probe sets selected by the global test and Wilcoxon rank-sum test with FDR less than 5%.

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