Changes in tryptophans 288 and 290 and creation of a NES motif in NPM mutant proteins generated by 29 NPM exon-12 mutations in 1554 patients with AML
Mutation . | Nucleotide sequence . | . | . | . | . | Protein sequence . | ||||
---|---|---|---|---|---|---|---|---|---|---|
WT* | gaccaagaggctattcaagatct | ctg | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLWQWRKSL | ||||
A | gaccaagaggctattcaagatct | ctgTCTG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCLAVEEVSLRK | ||||
B | gaccaagaggctattcaagatct | ctgCATG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCMAVEEVSLRK | ||||
C | gaccaagaggctattcaagatct | ctgCGTG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCVAVEEVSLRK | ||||
D | gaccaagaggctattcaagatct | ctgCCTG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCLAVEEVSLRK | ||||
E | gaccaagaggctattcaagatct | ctg | gcag | t CTCTTGCCC | aagtctctttaagaaaatag | 286-DLWQSLAQVSLRK | ||||
F | gaccaagaggctattcaagatct | ctg | gcag | t CCCTGGAGA | aagtctctttaagaaaatag | 286-DLWQSLEKVSLRK | ||||
E• | gaccaagaggctattcaagatct | ctg | gcag | t CCCTCGCCC | aagtctctttaagaaaatag | 286-DLWQSLAQVSLRK | ||||
G• | gaccaagaggctattcaagatct | ctg | gcag | t GCTTCGCCC | aagtctctttaagaaaatag | 286-DLWQCFAQVSLRK | ||||
H• | gaccaagaggctattcaagatct | ctg | gcag | t GTTTTTCAA | aagtctctttaagaaaatag | 286-DLWQCFSKVSLRK | ||||
Gm | gaccaagaggctattcaagatct | ctgCAGG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCRAVEEVSLRK | ||||
Km | gaccaagaggctattcaagatct | ctgCCGG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCRAVEEVSLRK | ||||
Lm | gaccaagaggctattcaagatct | ctgCCGCGGag | t | ggaggaagtctctttaagaaaatag | 286-DLCRGVEEVSLRK | |||||
Nm | gaccaagaggctattcaagatct | ctgCCAG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCQAVEEVSLRK | ||||
Om | gaccaagaggctattcaagatct | ctgTTTG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCLAVEEVSLRK | ||||
Qm | gaccaagaggctattcaagatct | ctgTCGG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCRAVEEVSLRK | ||||
1 | gaccaagaggctattcaagatct | ctg | gcagTCCA | t | ggaggaagtctctttaagaaaatag | 286-DLWQSMEEVSLRK | ||||
3 | gaccaagaggctattcaagatct | ctgTCAT | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCHAVEEVSLRK | ||||
4 | gaccaagaggctattcaagatct | ctgCTTG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCLAVEEVSLRK | ||||
6 | gaccaagaggctattcaagatct | ctg | gca AGATTTCTTAAATC | gtctctttaagaaaatag | 286-DLWQDFLNRLFKKIV | |||||
7 | gaccaagaggctattcaagatctATGC | ctg | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCLAVEEVSLRK | ||||
12 | gaccaagaggctattcaagatct | ctgGCCC | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCAAVEEVSLRK | ||||
13 | gaccaagaggctattcaagatct | ctgTAAG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCKAVEEVSLRK | ||||
10 | gaccaagaggctattcaagatct | ctg | gcag | tgCTGCTCCC | aagtctctttaagaaaatag | 286-DLWQCCSQVSLRK | ||||
14 | gaccaagaggctattcaagatct | ctg | gcag | t TATTTTCCC | aagtctctttaagaaaatag | 286-DLWQCCSQVSLRK | ||||
G† | gaccaagaggctattcaagatct | ctgTTTG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCLAVEEVSLRK | ||||
H† | gaccaagaggctattcaagatct | ctgCTTG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCLAVEEVSLRK | ||||
I† | gaccaagaggctattcaagatct | ctgTAAG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCKAVEEVSLRK | ||||
J† | gaccaagaggctattcaagatct | ctgTATG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCMAVEEVSLRK | ||||
IΔ | gaccaagaggctattcaagatct | ctgCAGA | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCRAVEEVSLRK |
Mutation . | Nucleotide sequence . | . | . | . | . | Protein sequence . | ||||
---|---|---|---|---|---|---|---|---|---|---|
WT* | gaccaagaggctattcaagatct | ctg | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLWQWRKSL | ||||
A | gaccaagaggctattcaagatct | ctgTCTG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCLAVEEVSLRK | ||||
B | gaccaagaggctattcaagatct | ctgCATG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCMAVEEVSLRK | ||||
C | gaccaagaggctattcaagatct | ctgCGTG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCVAVEEVSLRK | ||||
D | gaccaagaggctattcaagatct | ctgCCTG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCLAVEEVSLRK | ||||
E | gaccaagaggctattcaagatct | ctg | gcag | t CTCTTGCCC | aagtctctttaagaaaatag | 286-DLWQSLAQVSLRK | ||||
F | gaccaagaggctattcaagatct | ctg | gcag | t CCCTGGAGA | aagtctctttaagaaaatag | 286-DLWQSLEKVSLRK | ||||
E• | gaccaagaggctattcaagatct | ctg | gcag | t CCCTCGCCC | aagtctctttaagaaaatag | 286-DLWQSLAQVSLRK | ||||
G• | gaccaagaggctattcaagatct | ctg | gcag | t GCTTCGCCC | aagtctctttaagaaaatag | 286-DLWQCFAQVSLRK | ||||
H• | gaccaagaggctattcaagatct | ctg | gcag | t GTTTTTCAA | aagtctctttaagaaaatag | 286-DLWQCFSKVSLRK | ||||
Gm | gaccaagaggctattcaagatct | ctgCAGG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCRAVEEVSLRK | ||||
Km | gaccaagaggctattcaagatct | ctgCCGG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCRAVEEVSLRK | ||||
Lm | gaccaagaggctattcaagatct | ctgCCGCGGag | t | ggaggaagtctctttaagaaaatag | 286-DLCRGVEEVSLRK | |||||
Nm | gaccaagaggctattcaagatct | ctgCCAG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCQAVEEVSLRK | ||||
Om | gaccaagaggctattcaagatct | ctgTTTG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCLAVEEVSLRK | ||||
Qm | gaccaagaggctattcaagatct | ctgTCGG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCRAVEEVSLRK | ||||
1 | gaccaagaggctattcaagatct | ctg | gcagTCCA | t | ggaggaagtctctttaagaaaatag | 286-DLWQSMEEVSLRK | ||||
3 | gaccaagaggctattcaagatct | ctgTCAT | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCHAVEEVSLRK | ||||
4 | gaccaagaggctattcaagatct | ctgCTTG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCLAVEEVSLRK | ||||
6 | gaccaagaggctattcaagatct | ctg | gca AGATTTCTTAAATC | gtctctttaagaaaatag | 286-DLWQDFLNRLFKKIV | |||||
7 | gaccaagaggctattcaagatctATGC | ctg | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCLAVEEVSLRK | ||||
12 | gaccaagaggctattcaagatct | ctgGCCC | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCAAVEEVSLRK | ||||
13 | gaccaagaggctattcaagatct | ctgTAAG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCKAVEEVSLRK | ||||
10 | gaccaagaggctattcaagatct | ctg | gcag | tgCTGCTCCC | aagtctctttaagaaaatag | 286-DLWQCCSQVSLRK | ||||
14 | gaccaagaggctattcaagatct | ctg | gcag | t TATTTTCCC | aagtctctttaagaaaatag | 286-DLWQCCSQVSLRK | ||||
G† | gaccaagaggctattcaagatct | ctgTTTG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCLAVEEVSLRK | ||||
H† | gaccaagaggctattcaagatct | ctgCTTG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCLAVEEVSLRK | ||||
I† | gaccaagaggctattcaagatct | ctgTAAG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCKAVEEVSLRK | ||||
J† | gaccaagaggctattcaagatct | ctgTATG | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCMAVEEVSLRK | ||||
IΔ | gaccaagaggctattcaagatct | ctgCAGA | gcag | t | ggaggaagtctctttaagaaaatag | 286-DLCRAVEEVSLRK |
Mutations A to F refer to those originally identified in Falini et al.8 Mutations from E• to H• refer to those identified in childhood AML cases in Cazzaniga et al.30 Mutations Gm to Qm refer to those identified in Schnittger et al23 in protocol 99 of the German AML cooperative group; mutations 1, 3, 4, 6, 7, 12, 13, 10 and 14 according to Döhner et al22 ; mutations G†, I†, H† and J† according to Suzuki et al31 ; mutation IΔ according to Verhaak et al.24 Lowercase letters in nucleotide sequences indicate wild-type sequence residues; capital letters, mutated nucleotides. Underlined text indicates leucine-rich NES motif; italics, tryptophan (W) residues.
WT indicates wild type; L, leucin; V, valine; F, phenylalanine; M, methionine; C, cysteine.
NM 002520.