Table 4.

Ribosomal cluster identified by hierarchical cluster analysis

Accession no.Gene description
M60784 snRNP-specific protein A 
D28589 KIAA00167  
M30448 Casein kinase II-β 
X14046 CD37  
X55733 Initiation factor 4B, EIF-4B 
X73358 hAES-1 m  
U04241 Homolog of Drosophilaenhancer of split  
D87451 KIAA0262  
U07705 p58 GTA protein kinase  
D50310 Cyclin I 
X78136 hnRNP-E2 
M84711 Ribosomal protein S3A, component of S40 subunit 
X51466 Elongation factor 2, EF-2 
X57959 Ribosomal protein L7 
U25789 Ribosomal protein L21  
X55954 HL23 ribosomal protein 
X53505 Ribosomal protein S12 
X03689 Elongation factor TU (N-terminus)  
M31520 Ribosomal protein S24 
X16064 Translationally controlled tumor protein 
X62691 Ribosomal protein S24  
X56932 23-kd highly basic protein  
Z21507 Elongation factor-1 δ,EF-1δ  
X69391 Ribosomal protein L6 
Z25749 Ribosomal protein S7 
X69150 Ribosomal protein S18 
X60489 Elongation factor-1β, EF-1β  
Z26876 Ribosomal protein L38 
J03592 ADP/ATP translocase  
D49824 HLA-B 
Z12962 Homolog to yeast ribosomal protein L41 
J04617 Elongation factor-1 EF-1α  
L04483 Ribosomal protein S21 (RPS21) 
M17886 Acidic ribosomal phosphoprotein P1  
M36072 Ribosomal protein L7a (surf3) 
D89667 c-myc binding protein  
AB002533 qip1, importin α3 
14973 Ribosomal protein S29 
M24194 MHC protein homologous to chicken B-complex protein 
D13413 Tumor-associated 120 kd  
X06617 Ribosomal protein S11 
X79234 Ribosomal protein L11 
X00274 HLA-DRα  
J00105 β2-microglobulin 
U14972 Ribosomal protein S10 
U14970 Ribosomal protein S5 
U14971 Ribosomal protein S9 
U58682 Ribosomal protein S28  
U14969 Ribosomal protein L28 
X55715 40S ribosomal protein s3 
X53777 L23 m for putative ribosomal protein  
M14199 Laminin receptor (2H5 epitope) 
U43901 Laminin receptor/p40 ribosome-associated protein 
Z28407 Ribosomal protein L8 
M64716 Ribosomal protein S25 
D87735 Ribosomal protein L14 
X17206 Ribosomal protein S2  
M17885 Acidic ribosomal phosphoprotein P0 
D23660 Ribosomal protein 
S79522 Ubiquitin carboxyl extension protein 
L06499 Ribosomal protein L37a (RPL37A) 
L06505 Ribosomal protein L12 
M77232 Ribosomal protein S6 
D14530 Homolog of yeast ribosomal protein S28  
X67247 Ribosomal protein S8 
M55409 Elongation factor 1-γ, EF-1γ  
M81757 S19 ribosomal protein 
U12465 Ribosomal protein L35 
U12404 Ribosomal protein L10a, S60 subunit component 
X80822 Ribosomal L18A 
L11566 Ribosomal protein L18 (RPL18) 
X73460 Ribosomal protein L3 
X63527 Ribosomal protein L19 
M60854 Ribosomal protein S16 
X03342 Ribosomal protein L32 
M13934 Ribosomal protein S14  
X15940 Ribosomal protein L31 
L19527 Ribosomal protein L27 (RPL27) 
M18000 Ribosomal protein S17 
U09953 Ribosomal protein L9 
X64707 Ribosomal protein L13 
U70439 Silver-stainable protein SSP29  
U94855 Translation initiation factor 3, EIF3-P47  
Z49148 Ribosomal protein L29 
X74104 TRAP β-subunit  
U06155 Chromosome 1q subtelomeric  
L13848 Helicase A, DDX9: DEAD/H 
U85611 DNA-PK interaction protein (KIP) 
Accession no.Gene description
M60784 snRNP-specific protein A 
D28589 KIAA00167  
M30448 Casein kinase II-β 
X14046 CD37  
X55733 Initiation factor 4B, EIF-4B 
X73358 hAES-1 m  
U04241 Homolog of Drosophilaenhancer of split  
D87451 KIAA0262  
U07705 p58 GTA protein kinase  
D50310 Cyclin I 
X78136 hnRNP-E2 
M84711 Ribosomal protein S3A, component of S40 subunit 
X51466 Elongation factor 2, EF-2 
X57959 Ribosomal protein L7 
U25789 Ribosomal protein L21  
X55954 HL23 ribosomal protein 
X53505 Ribosomal protein S12 
X03689 Elongation factor TU (N-terminus)  
M31520 Ribosomal protein S24 
X16064 Translationally controlled tumor protein 
X62691 Ribosomal protein S24  
X56932 23-kd highly basic protein  
Z21507 Elongation factor-1 δ,EF-1δ  
X69391 Ribosomal protein L6 
Z25749 Ribosomal protein S7 
X69150 Ribosomal protein S18 
X60489 Elongation factor-1β, EF-1β  
Z26876 Ribosomal protein L38 
J03592 ADP/ATP translocase  
D49824 HLA-B 
Z12962 Homolog to yeast ribosomal protein L41 
J04617 Elongation factor-1 EF-1α  
L04483 Ribosomal protein S21 (RPS21) 
M17886 Acidic ribosomal phosphoprotein P1  
M36072 Ribosomal protein L7a (surf3) 
D89667 c-myc binding protein  
AB002533 qip1, importin α3 
14973 Ribosomal protein S29 
M24194 MHC protein homologous to chicken B-complex protein 
D13413 Tumor-associated 120 kd  
X06617 Ribosomal protein S11 
X79234 Ribosomal protein L11 
X00274 HLA-DRα  
J00105 β2-microglobulin 
U14972 Ribosomal protein S10 
U14970 Ribosomal protein S5 
U14971 Ribosomal protein S9 
U58682 Ribosomal protein S28  
U14969 Ribosomal protein L28 
X55715 40S ribosomal protein s3 
X53777 L23 m for putative ribosomal protein  
M14199 Laminin receptor (2H5 epitope) 
U43901 Laminin receptor/p40 ribosome-associated protein 
Z28407 Ribosomal protein L8 
M64716 Ribosomal protein S25 
D87735 Ribosomal protein L14 
X17206 Ribosomal protein S2  
M17885 Acidic ribosomal phosphoprotein P0 
D23660 Ribosomal protein 
S79522 Ubiquitin carboxyl extension protein 
L06499 Ribosomal protein L37a (RPL37A) 
L06505 Ribosomal protein L12 
M77232 Ribosomal protein S6 
D14530 Homolog of yeast ribosomal protein S28  
X67247 Ribosomal protein S8 
M55409 Elongation factor 1-γ, EF-1γ  
M81757 S19 ribosomal protein 
U12465 Ribosomal protein L35 
U12404 Ribosomal protein L10a, S60 subunit component 
X80822 Ribosomal L18A 
L11566 Ribosomal protein L18 (RPL18) 
X73460 Ribosomal protein L3 
X63527 Ribosomal protein L19 
M60854 Ribosomal protein S16 
X03342 Ribosomal protein L32 
M13934 Ribosomal protein S14  
X15940 Ribosomal protein L31 
L19527 Ribosomal protein L27 (RPL27) 
M18000 Ribosomal protein S17 
U09953 Ribosomal protein L9 
X64707 Ribosomal protein L13 
U70439 Silver-stainable protein SSP29  
U94855 Translation initiation factor 3, EIF3-P47  
Z49148 Ribosomal protein L29 
X74104 TRAP β-subunit  
U06155 Chromosome 1q subtelomeric  
L13848 Helicase A, DDX9: DEAD/H 
U85611 DNA-PK interaction protein (KIP) 

Gene names in italics denote genes that were present in the ribosomal clusters of both series UPN 1-38 (Figure 2A) and UPN 39-77 (Figure 2B).

ADP indicates adenosine diphosphate; ATP, adenosine triphosphate; MHC, major histocompatibility complex.

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