SAGE-identified nonmitochondrial tags
| Frequency . | CATG + SAGE tags3-150 . | Accession no.3-151 . | Gene . | Microarray3-152 . |
|---|---|---|---|---|
| 26 | GTTGTGGTTAATCTGGT | NM_004048.1 | β2-microglobulin (B2M), mRNA | PPP |
| 21 | TTGGTGAAGGAAGAAGT | NM_021109.1 | Thymosin β4, X chromosome (TMSB4X), mRNA | P |
| 8 | AGCTCCGCAGCCAGGTC | NM_002620.1 | Platelet factor 4 variant 1 (PF4VI), mRNA | p |
| 8 | AGCTCCGCAGCCGGGTT | NM_002619.1 | Platelet factor 4 (PF4), mRNA | P |
| 7 | TGTATAAAGACAACCTC | NM_002704.1 | Proplatelet basic protein (β-thromboglobulin) | Pp |
| 5 | GGGCACAATGCGGTCCA | NM_000407.1 | Glycoprotein Ibβ polypeptide, mRNA | P |
| 3 | AGGTAATAAAAGGTAAT | NM_003512.1 | H2A histone family, member L (H2AFL), mRNA | P |
| 3 | AGTGGCAAGTAAATGGC | NM_021914.2 | Cofilin 2 (muscle) (CFL2), mRNA | N/A |
| 3 | TGACTGTGCTGGGTTGG | NM_006176.1 | Neurogranin (protein kinase C substrate, RC3) mRNA | P |
| 3 | TTGGGGTTTCCTTTACC | NM_002032.1 | Ferritin, heavy polypeptide 1 (FTH1), mRNA | P |
| 2 | CCCTTGTGACTACCTAT | NM_025158.1 | Hypothetical protein FLJ22251 (FLJ22251), mRNA | N/A |
| 2 | CCTGTAACCCCAGCTAC | NM_032779.1 | Hypothetical protein FLJ14397 (FLJ14397), mRNA | N/A |
| 2 | CTTGTAGTCCCAGCTAC | NM_017962.1 | Hypothetical protein FLJ20825 (FLJ20825), mRNA | N/A |
| Frequency . | CATG + SAGE tags3-150 . | Accession no.3-151 . | Gene . | Microarray3-152 . |
|---|---|---|---|---|
| 26 | GTTGTGGTTAATCTGGT | NM_004048.1 | β2-microglobulin (B2M), mRNA | PPP |
| 21 | TTGGTGAAGGAAGAAGT | NM_021109.1 | Thymosin β4, X chromosome (TMSB4X), mRNA | P |
| 8 | AGCTCCGCAGCCAGGTC | NM_002620.1 | Platelet factor 4 variant 1 (PF4VI), mRNA | p |
| 8 | AGCTCCGCAGCCGGGTT | NM_002619.1 | Platelet factor 4 (PF4), mRNA | P |
| 7 | TGTATAAAGACAACCTC | NM_002704.1 | Proplatelet basic protein (β-thromboglobulin) | Pp |
| 5 | GGGCACAATGCGGTCCA | NM_000407.1 | Glycoprotein Ibβ polypeptide, mRNA | P |
| 3 | AGGTAATAAAAGGTAAT | NM_003512.1 | H2A histone family, member L (H2AFL), mRNA | P |
| 3 | AGTGGCAAGTAAATGGC | NM_021914.2 | Cofilin 2 (muscle) (CFL2), mRNA | N/A |
| 3 | TGACTGTGCTGGGTTGG | NM_006176.1 | Neurogranin (protein kinase C substrate, RC3) mRNA | P |
| 3 | TTGGGGTTTCCTTTACC | NM_002032.1 | Ferritin, heavy polypeptide 1 (FTH1), mRNA | P |
| 2 | CCCTTGTGACTACCTAT | NM_025158.1 | Hypothetical protein FLJ22251 (FLJ22251), mRNA | N/A |
| 2 | CCTGTAACCCCAGCTAC | NM_032779.1 | Hypothetical protein FLJ14397 (FLJ14397), mRNA | N/A |
| 2 | CTTGTAGTCCCAGCTAC | NM_017962.1 | Hypothetical protein FLJ20825 (FLJ20825), mRNA | N/A |
Unique tags identified more than once.
Refers to the RefSeq accession no.21 Note that this number does not necessarily correspond to the accession no. provided by Affymetrix software annotations (Table 1).
Presence (P) or absence (A) is based on results from 3 distinct platelet microarray experiments. Capitalized “P” designates a gene that is in the top 50 on all 3 microarray experiments, whereas small “p” designates those transcripts not in the top 50. Two of the genes (β2-microglobulin and β-thromboglobulin) are represented by 3 and 2 probe sets, respectively, on the HG-U95Av2 gene chip; for β2-M, all 3 probe sets were in the top 50 genes, whereas for thymosin β4 1 of 2 was in the top 50 for all experiments (the other probe set was in the top 75 for all experiments). N/A indicates oligonucleotide not present on Affymetrix HG-U95Av2 gene chip.