Primary (diagnostic), PDX T-ALL samples and cell lines analyzed and their maturation stage
Sample . | Sample type . | Blast frequency . | EGIL classification . | Subgroup . | IL7R-JAK-STAT mutation* . | JAK-STAT constitutive activation? . |
---|---|---|---|---|---|---|
T-ALL #01 | Primary | 90 | T-II | TAL/LMO | IL7R wt | n.d. |
T-ALL #02 | Primary | 90 | T-III | TLX | IL7R wt | n.d. |
T-ALL #03 | Primary | 87 | T-II | n.d. | IL7R wt | n.d. |
T-ALL #04 | Primary | 96 | T-IV | n.d. | IL7R wt | n.d. |
T-ALL #05 | PDX | 90 | T-II | n.d | IL7R wt | No |
T-ALL #06 | PDX | 85 | T-III | TAL/LMO | IL7R wt | No |
TAIL7 | Cell line | 100 | T-II | TAL/LMO | IL7R wt | No |
HPB-ALL | Cell line | 100 | T-III | TLX | IL7R wt | No |
JAK1 E966V† | ||||||
JAK1 Del(966-989)† |
Sample . | Sample type . | Blast frequency . | EGIL classification . | Subgroup . | IL7R-JAK-STAT mutation* . | JAK-STAT constitutive activation? . |
---|---|---|---|---|---|---|
T-ALL #01 | Primary | 90 | T-II | TAL/LMO | IL7R wt | n.d. |
T-ALL #02 | Primary | 90 | T-III | TLX | IL7R wt | n.d. |
T-ALL #03 | Primary | 87 | T-II | n.d. | IL7R wt | n.d. |
T-ALL #04 | Primary | 96 | T-IV | n.d. | IL7R wt | n.d. |
T-ALL #05 | PDX | 90 | T-II | n.d | IL7R wt | No |
T-ALL #06 | PDX | 85 | T-III | TAL/LMO | IL7R wt | No |
TAIL7 | Cell line | 100 | T-II | TAL/LMO | IL7R wt | No |
HPB-ALL | Cell line | 100 | T-III | TLX | IL7R wt | No |
JAK1 E966V† | ||||||
JAK1 Del(966-989)† |
European Group for the Immunological Characterization of Leukemias (EGIL) classification94 : Pro-T (T-I), CD7+, cytoplasmic CD3+; Pre-T (T-II), CD7+, CD2+, and/or CD5+, cytoplasmic CD3+; Cortical-T (T-III), CD1a+, cytoplasmic or surface CD3+; Mature-T (T-IV), CD1a−, surface CD3+.
n.d., not determined; LMO, LIM domain only; TAL, T-cell acute lymphocytic leukemia; TLX, T-cell leukemia homeobox; wt, wild-type.
Indicated only genes for which mutational status is known.
Mutations do not confer constitutive activity.95