List of genetic association studies of chronic lymphocytic leukemia (CLL).
Study design . | Reference . | NHL,*n . | CLL/SLL, n . | Control, n . | No. of genes . | No. of markers . | Notes . |
---|---|---|---|---|---|---|---|
Abbreviations: NHL, non-Hodgkin lymphoma; SLL, small lymphocytic lymphoma; SNPs, single nucleotide polymorphisms. | |||||||
Candidate gene | Machulla et al. Int J Cancer . 2001 ;92 :203 | 101 | 157 | 1 | HLA class 1 and 2 loci | ||
Wiley et al. Lancet . 2002 ; 359 :1114 | 36 | 46 | 1 | 1 | P2X7 receptor | ||
Thunberg et al. Lancet . 2002 ;360 :1935 | 170 | 200 | 1 | 1 | P2X7 receptor | ||
Starczynski et al. Br J Haematol . 2003 ;123 :66 | 121 | 95 | 1 | 1 | P2X7 receptor | ||
Zhang et al. Leukemia . 2003 ; 2097 | 144 | 348 | 1 | 1 | P2X7 receptor | ||
Nückel et al. Eur J Haematol . 2004 ;72 :259 | 111 | 97 | 1 | 1 | P2X7 receptor | ||
Sellick et al. Cancer Epidemiol Biomarkers Prev . 2004 ;13 :1065 | 424 | 428 | 1 | 1 | P2X7 receptor | ||
Bogunia-Kubik et al. Int J Immunogeneti . 2005 ;33 :21 –24 | 61 | 180 | 1 | 1 | TNF-alpha -308 SNP | ||
Guzowski et al. J Biomolecular Techniques . 2005 ;16 :154 | 17 | 25 | 1 | 3 | IL10 promoter SNPs | ||
Pérez-Chacón et a. Am J Clin Pathol . 2005 ;132 :646 | 134 | 102 | 1 | 1 | CD5 microsattellite | ||
Zhang et al. J Natl Cancer Inst . 2005 ;97 :1616 | 461 | 59 | 535 | 1 | 1 | BCL6 | |
Jamroziak et al. Pharmacological Reports . 2006 ;58 :720 | 110 | 201 | 1 | 1 | MDR1 | ||
Morton et al. Pharmacogenet Genomics . 2006 ;16 :537 | 1172 | 146 | 982 | 2 | 10 | NAT1 and NAT2 | |
Lan et al. Carcinogenesis . 2007 ;28 :823 | 461 | 59 | 535 | 4 | 5 | Caspase genes | |
Nückel et al. Blood . 2007 ;109 :290 | 123 | 120 | 1 | 1 | BCL2 | ||
Disease pathway | De Roos et al. Cancer Epidemiol Biomarkers Prev . 2006 ;15 :1647 | 1172 | 148 | 982 | 11 | 15 | Metabolic gene variants |
Hill et al. Blood . 2006 ;108 :3161 | 1172 | 148 | 982 | 19 | 34 | DNA repair and related genes | |
Shen et al. Hum Genet . 2006 ;119 :659 | 461 | 59 | 535 | 18 | 32 | DNA repair genes | |
Nieters et al. Genes Immun . 2006 ;7 :615 | 710 | 104 | 710 | 7 | 11 | Toll-like receptor, IL10, IL10RA | |
Wang et al. Hum Genet . 2006 ;120 :297 | 1172 | 148 | 982 | 7 | 12 | Cell cycle genes | |
Wang et al. Cancer Res . 2006 ;66 :9771 | 1172 | 148 | 982 | 36 | 57 | Proinflammatory and other immunoregulatory genes | |
Wang et al. Carcinogenesis . 2007 ;27 :1828 | 1172 | 148 | 982 | 10 | 13 | Oxidative stress pathway | |
Lan et al. Hum Genet . 2007 ;121 :161 | 461 | 59 | 535 | 10 | 14 | Oxidative stress pathway | |
Lim et al. Blood . 2007 ;109 :3050 | 1172 | 147 | 982 | 18 | 30 | Folate and 1 carbon metabolism | |
Cerhan et al. Blood . 2007 ; Sept 7 [Epub ahead of print] | 458 | 126 | 484 | 1450 | 7670 | Inflammation and immune genes | |
Genomic studies | Rudd et al. Blood . 2006 ;108 :638 | 992 | 2707 | 865 | 1467 | Nonsynonymous SNPs |
Study design . | Reference . | NHL,*n . | CLL/SLL, n . | Control, n . | No. of genes . | No. of markers . | Notes . |
---|---|---|---|---|---|---|---|
Abbreviations: NHL, non-Hodgkin lymphoma; SLL, small lymphocytic lymphoma; SNPs, single nucleotide polymorphisms. | |||||||
Candidate gene | Machulla et al. Int J Cancer . 2001 ;92 :203 | 101 | 157 | 1 | HLA class 1 and 2 loci | ||
Wiley et al. Lancet . 2002 ; 359 :1114 | 36 | 46 | 1 | 1 | P2X7 receptor | ||
Thunberg et al. Lancet . 2002 ;360 :1935 | 170 | 200 | 1 | 1 | P2X7 receptor | ||
Starczynski et al. Br J Haematol . 2003 ;123 :66 | 121 | 95 | 1 | 1 | P2X7 receptor | ||
Zhang et al. Leukemia . 2003 ; 2097 | 144 | 348 | 1 | 1 | P2X7 receptor | ||
Nückel et al. Eur J Haematol . 2004 ;72 :259 | 111 | 97 | 1 | 1 | P2X7 receptor | ||
Sellick et al. Cancer Epidemiol Biomarkers Prev . 2004 ;13 :1065 | 424 | 428 | 1 | 1 | P2X7 receptor | ||
Bogunia-Kubik et al. Int J Immunogeneti . 2005 ;33 :21 –24 | 61 | 180 | 1 | 1 | TNF-alpha -308 SNP | ||
Guzowski et al. J Biomolecular Techniques . 2005 ;16 :154 | 17 | 25 | 1 | 3 | IL10 promoter SNPs | ||
Pérez-Chacón et a. Am J Clin Pathol . 2005 ;132 :646 | 134 | 102 | 1 | 1 | CD5 microsattellite | ||
Zhang et al. J Natl Cancer Inst . 2005 ;97 :1616 | 461 | 59 | 535 | 1 | 1 | BCL6 | |
Jamroziak et al. Pharmacological Reports . 2006 ;58 :720 | 110 | 201 | 1 | 1 | MDR1 | ||
Morton et al. Pharmacogenet Genomics . 2006 ;16 :537 | 1172 | 146 | 982 | 2 | 10 | NAT1 and NAT2 | |
Lan et al. Carcinogenesis . 2007 ;28 :823 | 461 | 59 | 535 | 4 | 5 | Caspase genes | |
Nückel et al. Blood . 2007 ;109 :290 | 123 | 120 | 1 | 1 | BCL2 | ||
Disease pathway | De Roos et al. Cancer Epidemiol Biomarkers Prev . 2006 ;15 :1647 | 1172 | 148 | 982 | 11 | 15 | Metabolic gene variants |
Hill et al. Blood . 2006 ;108 :3161 | 1172 | 148 | 982 | 19 | 34 | DNA repair and related genes | |
Shen et al. Hum Genet . 2006 ;119 :659 | 461 | 59 | 535 | 18 | 32 | DNA repair genes | |
Nieters et al. Genes Immun . 2006 ;7 :615 | 710 | 104 | 710 | 7 | 11 | Toll-like receptor, IL10, IL10RA | |
Wang et al. Hum Genet . 2006 ;120 :297 | 1172 | 148 | 982 | 7 | 12 | Cell cycle genes | |
Wang et al. Cancer Res . 2006 ;66 :9771 | 1172 | 148 | 982 | 36 | 57 | Proinflammatory and other immunoregulatory genes | |
Wang et al. Carcinogenesis . 2007 ;27 :1828 | 1172 | 148 | 982 | 10 | 13 | Oxidative stress pathway | |
Lan et al. Hum Genet . 2007 ;121 :161 | 461 | 59 | 535 | 10 | 14 | Oxidative stress pathway | |
Lim et al. Blood . 2007 ;109 :3050 | 1172 | 147 | 982 | 18 | 30 | Folate and 1 carbon metabolism | |
Cerhan et al. Blood . 2007 ; Sept 7 [Epub ahead of print] | 458 | 126 | 484 | 1450 | 7670 | Inflammation and immune genes | |
Genomic studies | Rudd et al. Blood . 2006 ;108 :638 | 992 | 2707 | 865 | 1467 | Nonsynonymous SNPs |