Table 1 Small rCNAs with candidate genes... | American Society of Hematology

Table 1

Small rCNAs with candidate genes

rCNA ID	Locus	FL frequency	tFL frequency	tFL:FL ratio	No. of genes	Interesting genes
669	1p36.33+	0.025	0.076	3.008	56	TNFRSF14
122	1p36.33-p36.31−	0.247	0.241	0.972	51	TNFRSF14*, PRDM16
1	1p36.32− (×2)	0.025	0.038	1.504	16	PRDM16, TP73
124	1p36.11-p35.3−	0.045	0.051	1.114	40	ARID1A
674	1p22.3+	0.010	0.025	2.506	7	BCL10
1019	1p22.3+ (×2)	0.005	0.025	5.013	5	BCL10
125	1p13.1−	0.030	0.038	1.253	7	CD58*
714	2p16.3-p14+	0.030	0.051	1.671	72	REL, BCL11A
693	2p16.1-p15+	0.106	0.190	1.790	13	REL, BCL11A
1030	2p16.1-p15+ (×2)	0.086	0.114	1.327	8	REL, BCL11A
163	2q11.2−	0.015	0.038	2.506	1	AFF3
718	3q27.3-q28+	0.020	0.114	5.639	5	BCL6
275	5q33.3−	0.045	0.051	1.114	1	EBF1*
307	6p25.3−	0.020	0.114	5.639	9	IRF4
308	6p21.33-p21.32−	0.030	0.089	2.924	52	HLA-C, HLA-B
769	6p21.2-p21.1+	0.030	0.013	0.418	78	CCND3
342	6q16.3-q22.33−	0.035	0.038	1.074	127	PRDM1
312	6q21−	0.020	0.051	2.506	10	PRDM1
340	6q23.2-q25.1−	0.056	0.101	1.823	102	TNFAIP3, PERP
304	6q23.3-q24.1−	0.081	0.127	1.566	19	TNFAIP3, PERP
37	6q23.3− (×2)	0.056	0.101	1.823	1	TNFAIP3
787	7p22.3-p21.3+	0.025	0.076	3.008	89	CARD11, RNF216
1101	8q24.12-q24.3+ (×2)	0.030	0.038	1.253	109	MYC
818	8q24.13-q24.3+	0.106	0.114	1.074	174	MYC
402	9p21.3−	0.051	0.177	3.509	5	CDKN2A, CDKN2B
59	9p21.3− (×2)	0.030	0.114	3.759	4	CDKN2A, CDKN2B
407	9q34.3−	0.025	0.000	0.000	3	EHMT1
422	10q24.1−	0.040	0.114	2.820	7	LCOR*
447	11q14.1-q14.2−	0.015	0.025	1.671	5	EED
1146	12p11.22-q13.11+ (×2)	0.025	0.013	0.501	49	ARID2, DDX11, ALG10, KIF21A
866	12q12-q13.12+	0.020	0.038	1.880	47	ARID2, HDAC7, RPAP3
1145	12q13.2-q21.1+ (×2)	0.040	0.025	0.627	127	MDM2,TBK1, CDK4, STAT6
867	12q13.3+	0.025	0.025	1.003	18	STAT6
1125	12q15+ (×2)	0.020	0.063	3.133	22	MDM2
864	12q15+	0.030	0.025	0.835	17	MDM2
496	13q12.3-q13.2−	0.015	0.051	3.342	17
543	15q21.1−	0.040	0.114	2.820	4	B2M*
564	16p13.3−	0.025	0.051	2.005	8	CREBBP*
565	16p13.13−	0.015	0.051	3.342	4	CIITA*
585	17p13.3-p13.1−	0.071	0.152	2.148	160	TP53
966	18q21.2-q21.33+	0.025	0.038	1.504	43	MALT1, BCL2
606	19p13.3-p13.2−	0.045	0.114	2.506	23	CD70*

rCNA ID	Locus	FL frequency	tFL frequency	tFL:FL ratio	No. of genes	Interesting genes
669	1p36.33+	0.025	0.076	3.008	56	TNFRSF14
122	1p36.33-p36.31−	0.247	0.241	0.972	51	TNFRSF14*, PRDM16
1	1p36.32− (×2)	0.025	0.038	1.504	16	PRDM16, TP73
124	1p36.11-p35.3−	0.045	0.051	1.114	40	ARID1A
674	1p22.3+	0.010	0.025	2.506	7	BCL10
1019	1p22.3+ (×2)	0.005	0.025	5.013	5	BCL10
125	1p13.1−	0.030	0.038	1.253	7	CD58*
714	2p16.3-p14+	0.030	0.051	1.671	72	REL, BCL11A
693	2p16.1-p15+	0.106	0.190	1.790	13	REL, BCL11A
1030	2p16.1-p15+ (×2)	0.086	0.114	1.327	8	REL, BCL11A
163	2q11.2−	0.015	0.038	2.506	1	AFF3
718	3q27.3-q28+	0.020	0.114	5.639	5	BCL6
275	5q33.3−	0.045	0.051	1.114	1	EBF1*
307	6p25.3−	0.020	0.114	5.639	9	IRF4
308	6p21.33-p21.32−	0.030	0.089	2.924	52	HLA-C, HLA-B
769	6p21.2-p21.1+	0.030	0.013	0.418	78	CCND3
342	6q16.3-q22.33−	0.035	0.038	1.074	127	PRDM1
312	6q21−	0.020	0.051	2.506	10	PRDM1
340	6q23.2-q25.1−	0.056	0.101	1.823	102	TNFAIP3, PERP
304	6q23.3-q24.1−	0.081	0.127	1.566	19	TNFAIP3, PERP
37	6q23.3− (×2)	0.056	0.101	1.823	1	TNFAIP3
787	7p22.3-p21.3+	0.025	0.076	3.008	89	CARD11, RNF216
1101	8q24.12-q24.3+ (×2)	0.030	0.038	1.253	109	MYC
818	8q24.13-q24.3+	0.106	0.114	1.074	174	MYC
402	9p21.3−	0.051	0.177	3.509	5	CDKN2A, CDKN2B
59	9p21.3− (×2)	0.030	0.114	3.759	4	CDKN2A, CDKN2B
407	9q34.3−	0.025	0.000	0.000	3	EHMT1
422	10q24.1−	0.040	0.114	2.820	7	LCOR*
447	11q14.1-q14.2−	0.015	0.025	1.671	5	EED
1146	12p11.22-q13.11+ (×2)	0.025	0.013	0.501	49	ARID2, DDX11, ALG10, KIF21A
866	12q12-q13.12+	0.020	0.038	1.880	47	ARID2, HDAC7, RPAP3
1145	12q13.2-q21.1+ (×2)	0.040	0.025	0.627	127	MDM2,TBK1, CDK4, STAT6
867	12q13.3+	0.025	0.025	1.003	18	STAT6
1125	12q15+ (×2)	0.020	0.063	3.133	22	MDM2
864	12q15+	0.030	0.025	0.835	17	MDM2
496	13q12.3-q13.2−	0.015	0.051	3.342	17
543	15q21.1−	0.040	0.114	2.820	4	B2M*
564	16p13.3−	0.025	0.051	2.005	8	CREBBP*
565	16p13.13−	0.015	0.051	3.342	4	CIITA*
585	17p13.3-p13.1−	0.071	0.152	2.148	160	TP53
966	18q21.2-q21.33+	0.025	0.038	1.504	43	MALT1, BCL2
606	19p13.3-p13.2−	0.045	0.114	2.506	23	CD70*

Confirmed by PCR.

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