Table 3

Significant association between JAK2 intragene haplotypes and PV

Covariates/haplotypesSignificant individual haplotypes
Global P
Haplotype frequencyOdds ratios*P
Age at diagnosis, sex    <.001 
    AAAACTCAAGGGT 0.015 2000.2 .003 — 
    AAATCTTCTCGGT 0.148 0.528 .005 — 
    AACACTCAAGGGT 0.192 1.608 .026 — 
    GAAACTTCTCAGG 0.014 — .038 — 
    GACACTCAAGGGT 0.178 1.765 .023 — 
    GGAAACCCTCAAG 0.130 0.556 .019 — 
Age at diagnosis, sex, JAK2 mutation status    .034 
    AACACTCAAGGGT 0.192 1.20 .017 — 
    GGAAACCCTCAAG 0.130 0.36 .027 — 
Covariates/haplotypesSignificant individual haplotypes
Global P
Haplotype frequencyOdds ratios*P
Age at diagnosis, sex    <.001 
    AAAACTCAAGGGT 0.015 2000.2 .003 — 
    AAATCTTCTCGGT 0.148 0.528 .005 — 
    AACACTCAAGGGT 0.192 1.608 .026 — 
    GAAACTTCTCAGG 0.014 — .038 — 
    GACACTCAAGGGT 0.178 1.765 .023 — 
    GGAAACCCTCAAG 0.130 0.556 .019 — 
Age at diagnosis, sex, JAK2 mutation status    .034 
    AACACTCAAGGGT 0.192 1.20 .017 — 
    GGAAACCCTCAAG 0.130 0.36 .027 — 

PV indicates polycythemia vera; JAK2, Janus kinase 2; and —, not applicable.

*

Odds ratios computed for haplotypes with observed counts greater than 5.

Simulation based P values.

JAK2 intragene haplotypes that are significantly associated with PV, even after adjusting for JAK2V617F status.

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