Genes in the vicinity of the MHC class II or MHC2TA loci represented in GEP data
Gene . | Position relative to locus . |
|---|---|
| MHC class II locus | |
| HSPA1L | −597 Kb from HLA-DRA |
| HSPA1A | −594 Kb from HLA-DRA |
| BAT8 | −532 Kb from HLA-DRA |
| RDBP | −453 Kb from HLA-DRA |
| CREBL 1 | −317 Kb from HLA-DRA |
| PBX2 | −255 Kb from HLA-DRA |
| TAP2 | Between HLA-DQA and DMB |
| TAP1 | Between HLA-DQA and DMB |
| PSMB9 | Between HLA-DQA and DMB |
| BRD2 | Between HLA-DMA and DPA |
| RXRB | +77 Kb from HLA-DPB |
| RING1 | +85 Kb from HLA-DPB |
| RPS18 | +148 Kb from HLA-DPB |
| TAPBP | +186 Kb from HLA-DPB |
| DAXX | +195 Kb from HLA-DPB |
| BAK1 | +452 Kb from HLA-DPB |
| MHC2TA locus | |
| ABAT | −2203 Kb from MHC2TA |
| USP7 | −1914 Kb from MHC2TA |
| PRO0149 | −1786 Kb from MHC2TA |
| MHC2TA | 0 Kb from MHC2TA |
| SOCS1 | +379 Kb from MHC2TA |
| LITAF | +709 Kb from MHC2TA |
| GSPT1 | +1039 Kb from MHC2TA |
| TNFRSF17 | +1088 Kb from MHC2TA |
Gene . | Position relative to locus . |
|---|---|
| MHC class II locus | |
| HSPA1L | −597 Kb from HLA-DRA |
| HSPA1A | −594 Kb from HLA-DRA |
| BAT8 | −532 Kb from HLA-DRA |
| RDBP | −453 Kb from HLA-DRA |
| CREBL 1 | −317 Kb from HLA-DRA |
| PBX2 | −255 Kb from HLA-DRA |
| TAP2 | Between HLA-DQA and DMB |
| TAP1 | Between HLA-DQA and DMB |
| PSMB9 | Between HLA-DQA and DMB |
| BRD2 | Between HLA-DMA and DPA |
| RXRB | +77 Kb from HLA-DPB |
| RING1 | +85 Kb from HLA-DPB |
| RPS18 | +148 Kb from HLA-DPB |
| TAPBP | +186 Kb from HLA-DPB |
| DAXX | +195 Kb from HLA-DPB |
| BAK1 | +452 Kb from HLA-DPB |
| MHC2TA locus | |
| ABAT | −2203 Kb from MHC2TA |
| USP7 | −1914 Kb from MHC2TA |
| PRO0149 | −1786 Kb from MHC2TA |
| MHC2TA | 0 Kb from MHC2TA |
| SOCS1 | +379 Kb from MHC2TA |
| LITAF | +709 Kb from MHC2TA |
| GSPT1 | +1039 Kb from MHC2TA |
| TNFRSF17 | +1088 Kb from MHC2TA |
Positional differences calculated from the 5′ ends of the genes compared to the 5′ end of the nearest MHC class II gene or MHC2TA; positive numbers indicate centromeric direction.