Table 2.

Clinical studies using MRD in adult AML

Trial/study groupPatientsMRD techniqueKey finding
MRD guidance after induction in complete remission in intermediate-risk patients 
GIMEMA 1310, risk-adapted, MRD-directed therapy for young adults with newly diagnosed AML20  N = 429
≤60 years 
MFC Similar 2-year survival in MRD-negative intermediate-risk patients receiving autoSCT compared to MRD-positive patients receiving alloSCT. 
HOVON-SAKK 132: Addition of lenalidomide to intensive treatment in younger and middle-aged adults with newly diagnosed AML21  N = 780
AML/high-risk MDS
≤65 years 
MFC and NPM1 No difference in outcome between MRD-negative and MRD-positive intermediate-risk patients, while MRD-negative patients were considered eligible for non-alloSCT treatment. 
ChiCTR-TRC-10001202 and 10001209 NCT03021330: Prognostic effect and clinical application of early MRD by flow cytometry on de novo AML19  N = 769
<60 years 
MFC Overall survival of MRD-negative patients in favorable and intermediate-risk groups was comparable between transplant and nontransplant patients. 
Post-remission measurable residual disease directs treatment choice and improves outcomes for patients with intermediate-risk acute myeloid leukemia in CR149  N = 235
Intermediate risk
14-60 years 
MFC Retrospective analysis of real-world data postremission MRD directs treatment choice and improves outcomes for patients with intermediate-risk AML in CR1. 
Current retrospective studies showing relevance ofFLT3/ITD as MRD marker 
DNA sequencing to detect residual disease in adults with AML prior to hematopoietic cell transplant15  N = 1075
AML in CR1 before transplant
≥18 years 
NGS Persistence of FLT3-ITD or NPM1 variants in blood at an allele fraction of 0.01% or higher was associated with increased relapse and worse survival compared with those without variants detected. 
Prognostic value of FLT3-ITD residual disease in AML23  N = 161
FLT3-ITD+ AML in CR1 after induction
≥18 years 
NGS FLT3-ITD MRD is prognostic and better identifies patients at risk for relapse compared to MFC or NGS-based NMP1 MRD alone. 
Pretransplant FLT3-ITD MRD assessed by high-sensitivity PCR-NGS determines posttransplant clinical outcome26  N = 104
Pretransplant AML
17-68 years 
NGS Pre-HCT detection of FLT3-ITD MRD is related to poor prognosis and can be an indication for future MRD-directed therapeutic strategies. 
Allogenic stem cell transplantation conditioning/donor selection 
Impact of conditioning intensity of allogeneic transplantation for acute myeloid leukemia with genomic evidence of residual disease (CIBMTR)50  N = 190
≥18 years in first CR 
NGS: FLT3, NPM1, IDH1, IDH2, and/or KIT variants MAC rather than RIC in patients with AML with genomic evidence of MRD before alloHCT can result in improved survival. 
Impact of pre-transplant induction and consolidation cycles on AML allogeneic transplant outcomes: a CIBMTR analysis in 3113 AML patients51  N = 3113
≥18 years 
MFC, cytogenetics and molecular Detectable MRD at the time of MAC alloHCT did not impact outcomes while detectable MRD preceding RIC alloHCT was associated with an increased risk of relapse. 
Measurable residual disease, conditioning regimen intensity, and age predict outcome of allogeneic hematopoietic cell transplantation for acute myeloid leukemia in first remission52  N = 2292 (EBMT)
≥18 years 
MFC and molecular Patients aged <50 y with AML CR1 MRD-positive status should preferentially be offered MAC alloHCT. Prospective studies are needed to address whether patients who are AML CR1 MRD negative may be spared the toxicity of MAC regimens. 
Haploidentical allograft is superior to matched sibling donor allograft in eradicating pre-transplantation MRD of AML patients as determined by MFC: a retrospective and prospective analysis53  N = 339
≤60 years 
MFC For MRD-positive patients, haploSCT was associated with lower incidence of relapse and better survival, suggesting a stronger antileukemia effect compared to matched sibling donor transplantation. 
Monitoring during maintenance 
Prospective phase II (NCT00801489): Common kinase mutations do not impact optimal molecular responses in CBF AML treated with fludarabine, cytarabine, and G-CSF based regimens54  N = 174
≥18 years 
Optimal PCR response FLT3, RAS, and KIT Attainment of PCR <0.01% during/after consolidation improved RFS and was more important than achieving early optimal PCR response (post C1 PCR <0.1%). 
Observational cohort: MRD status and FLT3 inhibitor therapy in patients with FLT3/ITD mutated AML following allogeneic hematopoietic cell transplantation55  N = 34
≥18 years 
NGS: FLT3/ITD Prognostic significance of NGS-based MRD monitoring for FLT3/ITD and the ability of post-alloSCT maintenance to prevent relapse and death. 
Measurable residual disease-guided treatment with azacitidine to prevent haematological relapse in patients with myelodysplastic syndrome and acute myeloid leukaemia (RELAZA2): an open-label, multicentre, phase 2 trial56  N = 53
≥18 years
CR-MRD+ 
qPCR: NPM1, DEK-NUP214, RUNX1-RUNX1T1, CBFb-MYH11 MRD-guided treatment with azacitidine prevented or substantially delayed hematologic relapse with an acceptable safety. 
Monitoring after treatment 
Posttransplant MRD and T-cell chimerism status predict outcomes in patients allografted with AML/MDS (FIGARO) N = 187
≥18 years
Peri-alloSCT 
MFC and T-cell chimerism Post-alloSCT MRD is an important predictor of outcome and is most informative when combined with T-cell chimerism. 
Bone marrow CD34+ molecular chimerism as an early predictor of relapse after alloSCT in patients with AML (PROMISE)57  N = 168
<75 years
After alloSCT 
Molecular WT1 and CD34+ chimerism Molecular chimerism and WT1 after alloSCT (first and third months) are useful MRD markers. When considered together at third month, CD34+ molecular chimerism could represent an earlier predictor of relapse compared to WT1
MRD in nonintensively treated patients 
Undetectable measurable residual disease is associated with improved outcomes in AML irrespective of treatment intensity. Retrospective analysis of real world data58  N = 635 (250 nonintensively treated)
≥18 years 
MFC: excluding APL and CBF AML Achievement of MRD negativity should be the key objective of AML therapy in both high- and low-intensity treatment regimens. 
Measurable residual disease response and prognosis in treatment-naïve acute myeloid leukemia with venetoclax and azacitidine (VIALE-A)46  N = 190 (164 in CRc for MRD assessment)
≥18 years 
MFC Patients who achieved CRc and MRD negativity at any time point during treatment with venetoclax and azacitidine had longer duration of response, EFS, and OS than responding MRD-positive patients 
Ibrutinib added to 10-day decitabine for older patients with AML and higher risk MDS (HOVON-SAKK 135)59  N = 144
Unfit AML/high-risk MDS >60 years 
MFC After 3 cycles of treatment, 28 (49%) of 57 patients were MRD negative. In this limited number of cases, MRD revealed no apparent impact on outcome. 
MRD characterization for targeted therapy 
ALLG AMLM26 phase 1B/2 study investigating novel therapies to target early relapse and clonal evolution as pre-emptive therapy in AML (INTERCEPT): a multi-arm, precision-based, recursive, platform trial60  Patients with MRD-relapse
≥18 years 
MFC and molecular Ongoing study:
The primary end point is MRD response (≥1 log10 reduction in molecular MRD or flow MRD <0.1%) within 100 days of the first dose of study drug. 
Intermediate end point 
Early assessment of clofarabine effectiveness based on measurable residual disease, including AML stem cells (HOVON-SAKK 102)38  N = 291
≤65 years 
MFC including leukemia stem cells and NPM1 Lower levels of MRD were found in clofarabine-treated patients than in patients treated without clofarabine in the intermediate-I risk group. 
Umbrella trial in myeloid malignancies: the MyeloMATCH National Clinical Trials Network Precision Medicine Initiative61  Older adults, MDS and young adults MFC and NGS Ongoing study:
Assignment of treatment to patients based on biomarkers related to the disease such as mutations and MRD. 
Trial/study groupPatientsMRD techniqueKey finding
MRD guidance after induction in complete remission in intermediate-risk patients 
GIMEMA 1310, risk-adapted, MRD-directed therapy for young adults with newly diagnosed AML20  N = 429
≤60 years 
MFC Similar 2-year survival in MRD-negative intermediate-risk patients receiving autoSCT compared to MRD-positive patients receiving alloSCT. 
HOVON-SAKK 132: Addition of lenalidomide to intensive treatment in younger and middle-aged adults with newly diagnosed AML21  N = 780
AML/high-risk MDS
≤65 years 
MFC and NPM1 No difference in outcome between MRD-negative and MRD-positive intermediate-risk patients, while MRD-negative patients were considered eligible for non-alloSCT treatment. 
ChiCTR-TRC-10001202 and 10001209 NCT03021330: Prognostic effect and clinical application of early MRD by flow cytometry on de novo AML19  N = 769
<60 years 
MFC Overall survival of MRD-negative patients in favorable and intermediate-risk groups was comparable between transplant and nontransplant patients. 
Post-remission measurable residual disease directs treatment choice and improves outcomes for patients with intermediate-risk acute myeloid leukemia in CR149  N = 235
Intermediate risk
14-60 years 
MFC Retrospective analysis of real-world data postremission MRD directs treatment choice and improves outcomes for patients with intermediate-risk AML in CR1. 
Current retrospective studies showing relevance ofFLT3/ITD as MRD marker 
DNA sequencing to detect residual disease in adults with AML prior to hematopoietic cell transplant15  N = 1075
AML in CR1 before transplant
≥18 years 
NGS Persistence of FLT3-ITD or NPM1 variants in blood at an allele fraction of 0.01% or higher was associated with increased relapse and worse survival compared with those without variants detected. 
Prognostic value of FLT3-ITD residual disease in AML23  N = 161
FLT3-ITD+ AML in CR1 after induction
≥18 years 
NGS FLT3-ITD MRD is prognostic and better identifies patients at risk for relapse compared to MFC or NGS-based NMP1 MRD alone. 
Pretransplant FLT3-ITD MRD assessed by high-sensitivity PCR-NGS determines posttransplant clinical outcome26  N = 104
Pretransplant AML
17-68 years 
NGS Pre-HCT detection of FLT3-ITD MRD is related to poor prognosis and can be an indication for future MRD-directed therapeutic strategies. 
Allogenic stem cell transplantation conditioning/donor selection 
Impact of conditioning intensity of allogeneic transplantation for acute myeloid leukemia with genomic evidence of residual disease (CIBMTR)50  N = 190
≥18 years in first CR 
NGS: FLT3, NPM1, IDH1, IDH2, and/or KIT variants MAC rather than RIC in patients with AML with genomic evidence of MRD before alloHCT can result in improved survival. 
Impact of pre-transplant induction and consolidation cycles on AML allogeneic transplant outcomes: a CIBMTR analysis in 3113 AML patients51  N = 3113
≥18 years 
MFC, cytogenetics and molecular Detectable MRD at the time of MAC alloHCT did not impact outcomes while detectable MRD preceding RIC alloHCT was associated with an increased risk of relapse. 
Measurable residual disease, conditioning regimen intensity, and age predict outcome of allogeneic hematopoietic cell transplantation for acute myeloid leukemia in first remission52  N = 2292 (EBMT)
≥18 years 
MFC and molecular Patients aged <50 y with AML CR1 MRD-positive status should preferentially be offered MAC alloHCT. Prospective studies are needed to address whether patients who are AML CR1 MRD negative may be spared the toxicity of MAC regimens. 
Haploidentical allograft is superior to matched sibling donor allograft in eradicating pre-transplantation MRD of AML patients as determined by MFC: a retrospective and prospective analysis53  N = 339
≤60 years 
MFC For MRD-positive patients, haploSCT was associated with lower incidence of relapse and better survival, suggesting a stronger antileukemia effect compared to matched sibling donor transplantation. 
Monitoring during maintenance 
Prospective phase II (NCT00801489): Common kinase mutations do not impact optimal molecular responses in CBF AML treated with fludarabine, cytarabine, and G-CSF based regimens54  N = 174
≥18 years 
Optimal PCR response FLT3, RAS, and KIT Attainment of PCR <0.01% during/after consolidation improved RFS and was more important than achieving early optimal PCR response (post C1 PCR <0.1%). 
Observational cohort: MRD status and FLT3 inhibitor therapy in patients with FLT3/ITD mutated AML following allogeneic hematopoietic cell transplantation55  N = 34
≥18 years 
NGS: FLT3/ITD Prognostic significance of NGS-based MRD monitoring for FLT3/ITD and the ability of post-alloSCT maintenance to prevent relapse and death. 
Measurable residual disease-guided treatment with azacitidine to prevent haematological relapse in patients with myelodysplastic syndrome and acute myeloid leukaemia (RELAZA2): an open-label, multicentre, phase 2 trial56  N = 53
≥18 years
CR-MRD+ 
qPCR: NPM1, DEK-NUP214, RUNX1-RUNX1T1, CBFb-MYH11 MRD-guided treatment with azacitidine prevented or substantially delayed hematologic relapse with an acceptable safety. 
Monitoring after treatment 
Posttransplant MRD and T-cell chimerism status predict outcomes in patients allografted with AML/MDS (FIGARO) N = 187
≥18 years
Peri-alloSCT 
MFC and T-cell chimerism Post-alloSCT MRD is an important predictor of outcome and is most informative when combined with T-cell chimerism. 
Bone marrow CD34+ molecular chimerism as an early predictor of relapse after alloSCT in patients with AML (PROMISE)57  N = 168
<75 years
After alloSCT 
Molecular WT1 and CD34+ chimerism Molecular chimerism and WT1 after alloSCT (first and third months) are useful MRD markers. When considered together at third month, CD34+ molecular chimerism could represent an earlier predictor of relapse compared to WT1
MRD in nonintensively treated patients 
Undetectable measurable residual disease is associated with improved outcomes in AML irrespective of treatment intensity. Retrospective analysis of real world data58  N = 635 (250 nonintensively treated)
≥18 years 
MFC: excluding APL and CBF AML Achievement of MRD negativity should be the key objective of AML therapy in both high- and low-intensity treatment regimens. 
Measurable residual disease response and prognosis in treatment-naïve acute myeloid leukemia with venetoclax and azacitidine (VIALE-A)46  N = 190 (164 in CRc for MRD assessment)
≥18 years 
MFC Patients who achieved CRc and MRD negativity at any time point during treatment with venetoclax and azacitidine had longer duration of response, EFS, and OS than responding MRD-positive patients 
Ibrutinib added to 10-day decitabine for older patients with AML and higher risk MDS (HOVON-SAKK 135)59  N = 144
Unfit AML/high-risk MDS >60 years 
MFC After 3 cycles of treatment, 28 (49%) of 57 patients were MRD negative. In this limited number of cases, MRD revealed no apparent impact on outcome. 
MRD characterization for targeted therapy 
ALLG AMLM26 phase 1B/2 study investigating novel therapies to target early relapse and clonal evolution as pre-emptive therapy in AML (INTERCEPT): a multi-arm, precision-based, recursive, platform trial60  Patients with MRD-relapse
≥18 years 
MFC and molecular Ongoing study:
The primary end point is MRD response (≥1 log10 reduction in molecular MRD or flow MRD <0.1%) within 100 days of the first dose of study drug. 
Intermediate end point 
Early assessment of clofarabine effectiveness based on measurable residual disease, including AML stem cells (HOVON-SAKK 102)38  N = 291
≤65 years 
MFC including leukemia stem cells and NPM1 Lower levels of MRD were found in clofarabine-treated patients than in patients treated without clofarabine in the intermediate-I risk group. 
Umbrella trial in myeloid malignancies: the MyeloMATCH National Clinical Trials Network Precision Medicine Initiative61  Older adults, MDS and young adults MFC and NGS Ongoing study:
Assignment of treatment to patients based on biomarkers related to the disease such as mutations and MRD. 

alloHCT, allogeneic hematopoietic cell transplantation; APL, acute promyelocytic leukemia; autoSCT, autologous stem cell transplantation; CRc, complete remission rate; EBMT, European Society for Blood and Marrow Transplantation; haploSCT, haploidentical stem cell transplantation; HCT, hematopoietic cell transplantation; MAC, myeloablative conditioning; MDS, myelodysplastic syndrome; RFS, relapse free survival; RIC, reduced intensity conditioning.

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