Table 2.

Peripheral blood smear and bone marrow findings in IEI associated with neutropenia

Hematopathologic findingIEI to consider in differentialAdditional comments
Absent or decreased neutrophil granules GFI1-related neutropenia
JAGN1-related neutropenia
Specific granule deficiency 
In specific granule deficiency, neutrophils with bilobed nuclei are commonly observed. 
Atypical megakaryocytes GATA2 haploinsufficiency Megakaryocytes may be small or mononuclear or may have separated nuclear lobes. Often associated with marrow fibrosis.21  
Giant cytoplasmic granules Chediak-Higashi syndrome Giant azurophilic granules within the lysosomes are considered pathognomonic for the disorder and are easily visible in neutrophils, eosinophils, and other granulocytes.51 
Additional findings in the marrow include extensive vacuolization, acidophilic inclusion (esp in promyelocytes), specific granules easily recognized as early as the myelocyte stage. 
Myelofibrosis DADA215 
GATA2 haploinsufficiency21 
VPS45-related neutropenia52  
DADA2 is also associated with lymphoid aggregates in the marrow. 
Myelokathexis WHIM syndrome23 
G6PC3-related neutropenia53  
Neutrophils are also often hypersegmented with thin, long isthmi, pyknotic nuclei, and cytoplasmic vacuoles in WHIM syndrome. 
Neutrophil nuclei herniation WDR1 deficiency54  In addition to herniation of the nuclear lobes, neutrophils also have agranular regions within the cytosol. 
PHA NBAS deficiency Pseudo-PHA is associated with various medications (eg, immunosuppressive agents, antimicrobials, growth factors). The pseudo-PHA is generally reversible with medication cessation.54  PHA also seen in association with MDS. 
Promyelocyte arrest Severe, permanent arrest:55 
ELANE-related neutropenia (severe congenital phenotype)
HAX-1-related neutropenia
CSF3R-related neutropenia
G6PC3-related neutropenia
WAS-related neutropenia
JAGN1-related neutropenia56 
Mild, intermittent arrest:
GFI1-related neutropenia
Neutropenia associated with poikiloderma 
Copper deficiency can also result in maturation arrest; reversible with copper administration.
Promyelocytic AML can mimic the promyelocytic arrest associated with IEI but is easily differentiated by additional flow and/or cytogenetic studies. 
Hematopathologic findingIEI to consider in differentialAdditional comments
Absent or decreased neutrophil granules GFI1-related neutropenia
JAGN1-related neutropenia
Specific granule deficiency 
In specific granule deficiency, neutrophils with bilobed nuclei are commonly observed. 
Atypical megakaryocytes GATA2 haploinsufficiency Megakaryocytes may be small or mononuclear or may have separated nuclear lobes. Often associated with marrow fibrosis.21  
Giant cytoplasmic granules Chediak-Higashi syndrome Giant azurophilic granules within the lysosomes are considered pathognomonic for the disorder and are easily visible in neutrophils, eosinophils, and other granulocytes.51 
Additional findings in the marrow include extensive vacuolization, acidophilic inclusion (esp in promyelocytes), specific granules easily recognized as early as the myelocyte stage. 
Myelofibrosis DADA215 
GATA2 haploinsufficiency21 
VPS45-related neutropenia52  
DADA2 is also associated with lymphoid aggregates in the marrow. 
Myelokathexis WHIM syndrome23 
G6PC3-related neutropenia53  
Neutrophils are also often hypersegmented with thin, long isthmi, pyknotic nuclei, and cytoplasmic vacuoles in WHIM syndrome. 
Neutrophil nuclei herniation WDR1 deficiency54  In addition to herniation of the nuclear lobes, neutrophils also have agranular regions within the cytosol. 
PHA NBAS deficiency Pseudo-PHA is associated with various medications (eg, immunosuppressive agents, antimicrobials, growth factors). The pseudo-PHA is generally reversible with medication cessation.54  PHA also seen in association with MDS. 
Promyelocyte arrest Severe, permanent arrest:55 
ELANE-related neutropenia (severe congenital phenotype)
HAX-1-related neutropenia
CSF3R-related neutropenia
G6PC3-related neutropenia
WAS-related neutropenia
JAGN1-related neutropenia56 
Mild, intermittent arrest:
GFI1-related neutropenia
Neutropenia associated with poikiloderma 
Copper deficiency can also result in maturation arrest; reversible with copper administration.
Promyelocytic AML can mimic the promyelocytic arrest associated with IEI but is easily differentiated by additional flow and/or cytogenetic studies. 

AML, acute myeloid leukemia; MDS, myelodysplastic syndrome; PHA, Pelger-Huet anomaly.

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