Expression of Siglec-6 in primary AML blasts and anti-AML reactivity of Siglec-6_BBz CAR T cells
Patient rank . | NMFI . | Cell lysis (%) . | Disease status . | Age (y) . | Secondary AML . | Molecular biology . | Cytogenetics . | Blasts (%) . | Patient ID no. . |
---|---|---|---|---|---|---|---|---|---|
1 | 0.89 | 30 | Relapse | 86 | No | NPM1, FLT3 (ITD) | Normal | 18.9 | 17 |
2 | 1.03 | 71 | Diagnosis | 74 | No | FLT3 (TKD) | –Y, del(21)(q21q22), +13 | 89.5 | 9 |
3 | 1.05 | 58 | Diagnosis | 30 | Yes | — | PDGFRa+ | 85.2 | 13 |
4 | 1.10 | 0 | Relapse | 73 | Yes | — | Normal | 75.4 | 12 |
5 | 1.11 | 99 | Diagnosis | 78 | No | NPM1 | Normal | 93.2 | 20 |
6 | 1.14 | 49 | Diagnosis | 68 | Yes | NA | NA | 43.7 | 23 |
7 | 1.16 | 55 | Relapse | 77 | Yes | — | Normal | 14.8 | 18 |
8 | 1.18 | 0 | Diagnosis | 81 | No | CEBPα biallelic | Normal | 92.5 | 19 |
9 | 1.22 | 41 | NA | 36 | NA | NA | NA | 48.5 | 3 |
10 | 1.29 | 70* | Diagnosis | 22 | No | — | MLL(11q23) translocation | 59.0 | 16 |
11 | 1.35 | 96* | Diagnosis | 59 | NA | NA | NA | 67.5 | 7 |
12 | 1.36 | 62 | Diagnosis | 59 | NA | NA | NA | 89 | 8 |
13 | 1.42 | NA | Diagnosis | 39 | No | CBFB_ MYH11/inv16 | Normal | 93.0 | 22 |
14 | 1.67 | 86* | Diagnosis | 36 | No | NPM1, FLT3 (ITD) | Normal | 85.9 | 14 |
15 | 1.75 | 90 | Diagnosis | 71 | No | DNMT3A, FLT3 (ITD), RUNX1 | Normal | 79.4 | 1 |
16 | 1.96 | 98 | Relapse | 71 | No | NPM1, FLT3 (ITD) | Extra material of unknown origin in 12p | 78.4 | 21 |
17 | 2.34 | 99 | Relapse | 54 | No | RUNX1 | t(12;17)(p13;q11) .ish, t(12;17)(NF1–; NF1–) | 46 | 5 |
18 | 2.47 | 86 | Relapse | 76 | Yes | DNMT3A, TET2, TP53 | Normal | 53.8 | 11 |
19 | 3.35 | 97 | Diagnosis | 81 | Yes | NA | NA | 95.1 | 2 |
20 | 5.79 | 98 | Diagnosis | 52 | No | — | t(4;13)(q12;q13) | 46 | 10 |
Patient rank . | NMFI . | Cell lysis (%) . | Disease status . | Age (y) . | Secondary AML . | Molecular biology . | Cytogenetics . | Blasts (%) . | Patient ID no. . |
---|---|---|---|---|---|---|---|---|---|
1 | 0.89 | 30 | Relapse | 86 | No | NPM1, FLT3 (ITD) | Normal | 18.9 | 17 |
2 | 1.03 | 71 | Diagnosis | 74 | No | FLT3 (TKD) | –Y, del(21)(q21q22), +13 | 89.5 | 9 |
3 | 1.05 | 58 | Diagnosis | 30 | Yes | — | PDGFRa+ | 85.2 | 13 |
4 | 1.10 | 0 | Relapse | 73 | Yes | — | Normal | 75.4 | 12 |
5 | 1.11 | 99 | Diagnosis | 78 | No | NPM1 | Normal | 93.2 | 20 |
6 | 1.14 | 49 | Diagnosis | 68 | Yes | NA | NA | 43.7 | 23 |
7 | 1.16 | 55 | Relapse | 77 | Yes | — | Normal | 14.8 | 18 |
8 | 1.18 | 0 | Diagnosis | 81 | No | CEBPα biallelic | Normal | 92.5 | 19 |
9 | 1.22 | 41 | NA | 36 | NA | NA | NA | 48.5 | 3 |
10 | 1.29 | 70* | Diagnosis | 22 | No | — | MLL(11q23) translocation | 59.0 | 16 |
11 | 1.35 | 96* | Diagnosis | 59 | NA | NA | NA | 67.5 | 7 |
12 | 1.36 | 62 | Diagnosis | 59 | NA | NA | NA | 89 | 8 |
13 | 1.42 | NA | Diagnosis | 39 | No | CBFB_ MYH11/inv16 | Normal | 93.0 | 22 |
14 | 1.67 | 86* | Diagnosis | 36 | No | NPM1, FLT3 (ITD) | Normal | 85.9 | 14 |
15 | 1.75 | 90 | Diagnosis | 71 | No | DNMT3A, FLT3 (ITD), RUNX1 | Normal | 79.4 | 1 |
16 | 1.96 | 98 | Relapse | 71 | No | NPM1, FLT3 (ITD) | Extra material of unknown origin in 12p | 78.4 | 21 |
17 | 2.34 | 99 | Relapse | 54 | No | RUNX1 | t(12;17)(p13;q11) .ish, t(12;17)(NF1–; NF1–) | 46 | 5 |
18 | 2.47 | 86 | Relapse | 76 | Yes | DNMT3A, TET2, TP53 | Normal | 53.8 | 11 |
19 | 3.35 | 97 | Diagnosis | 81 | Yes | NA | NA | 95.1 | 2 |
20 | 5.79 | 98 | Diagnosis | 52 | No | — | t(4;13)(q12;q13) | 46 | 10 |
The NMFI is calculated by dividing the MFI obtained after staining with anti-Siglec-6 mAb by the MFI obtained by staining with an isotype control. Cytolytic activity against primary AML blasts was analyzed in a flow cytometry-based assay after 24-hour coculture. Data in the table correspond to 2.5:1 E:T ratio. Patients with AML who had ≤5% bone marrow AML blasts were excluded from analysis.
CEBP α, CCAAT/enhancer-binding protein α; DNMT3A, DNA (cytosine-5)–methyltransferase 3A; FLT3, FMS-like tyrosine kinase 3; ITD, internal tandem duplication; NPM1, nucleophosmin 1; RUNX1; runt-related transcription factor 1; TKD, tyrosine kinase domain; TP53, tumor protein p53; MLL, mixed lineage leukemia; PDGFRa, platelet-derived growth factor receptor A.
Indicates AML blasts lysis by autologous Siglec-6 CAR T cells.